Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 RNU6-747P-201ENST00000390928 104 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-241P-201ENST00000391148 104 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 RNU2-7P-201ENST00000410794 178 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-177P-201ENST00000411257 104 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 AC093850.1-201ENST00000454121 251 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZSWIM3Q96MP5 MIR342-201ENST00000362212 99 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-661P-201ENST00000362409 107 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RNU1-17P-201ENST00000363022 152 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 SNORA16B-201ENST00000364674 135 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.369-201ENST00000365568 117 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-1113P-201ENST00000384348 107 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 SNORA26.6-201ENST00000391256 115 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 AL022718.1-201ENST00000412004 84 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RPS29P29-201ENST00000456396 171 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 RNU6-158P-201ENST00000517104 100 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 AC004812.1-201ENST00000540773 146 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 MIR5582-201ENST00000579697 68 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 AC095038.3-201ENST00000634439 195 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 AL162726.3-218ENST00000636401 95 ntBASIC2.09□□□□□ -2.07
ZSWIM3Q96MP5 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 MIR302B-201ENST00000362188 73 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 SNORD115-2-201ENST00000362842 82 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 SNORD115-20-201ENST00000365099 82 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.544-201ENST00000384650 113 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 RNU7-73P-201ENST00000458743 63 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 SNORD123-201ENST00000459473 70 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 AC107297.1-201ENST00000459991 176 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 RNA5SP458-201ENST00000516188 119 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 MIR5089-201ENST00000580047 84 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 AC087741.2-201ENST00000619415 172 ntBASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.08□□□□□ -2.08
ZSWIM3Q96MP5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.430-201ENST00000384081 110 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 MIR583-201ENST00000384846 75 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 SNORD28B-201ENST00000390993 75 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 AC019129.1-201ENST00000403786 261 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 AL512326.2-201ENST00000426359 151 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 RNU7-53P-201ENST00000516705 60 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.818-201ENST00000618813 71 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
ZSWIM3Q96MP5 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.140-201ENST00000363474 103 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 SNORA51.10-201ENST00000384418 136 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 MIR1912-201ENST00000410389 80 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-893P-201ENST00000458841 100 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-904P-201ENST00000516206 101 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-1258P-201ENST00000516911 111 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 MIR3618-201ENST00000580330 88 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 MIR548AR-201ENST00000582191 57 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 AC006254.2-201ENST00000603259 279 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 AL020996.3-201ENST00000606617 222 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-1123P-201ENST00000362347 106 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.537-201ENST00000384626 109 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 MIR194-1-201ENST00000384892 85 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 MIR590-201ENST00000385008 97 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-360P-201ENST00000390944 104 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 RNU7-45P-201ENST00000459460 63 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 AC055731.1-201ENST00000474387 401 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 RNA5SP182-201ENST00000516064 82 ntBASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.299-201ENST00000364973 94 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 RNU6-913P-201ENST00000390913 95 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 SNORA19.1-201ENST00000410656 129 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 RNU7-6P-201ENST00000516845 62 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 SNORA74.3-201ENST00000517108 154 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 RNU2-19P-201ENST00000517288 84 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 MIR4791-201ENST00000607666 84 ntBASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.04□□□□□ -2.08
ZSWIM3Q96MP5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 SNORA22.1-201ENST00000362701 134 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 RNA5SP261-201ENST00000410536 106 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AL356379.1-201ENST00000414105 126 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AL445685.2-201ENST00000422551 342 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AC113410.1-201ENST00000505029 247 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AP000942.3-201ENST00000603702 160 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AC243994.1-201ENST00000618627 109 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 AL359851.1-201ENST00000569460 4997 ntBASIC2.03□□□□□ -2.08
ZSWIM3Q96MP5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms