Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-102P-201ENST00000384485 104 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 SNORD93-201ENST00000408813 74 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU4-83P-201ENST00000410863 133 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-976P-201ENST00000516086 111 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-397P-201ENST00000516226 104 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-469P-201ENST00000516253 101 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 AP003733.2-201ENST00000529409 171 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 AC040926.1-201ENST00000530195 238 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 MIR4724-201ENST00000579485 89 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 MIR6717-201ENST00000622747 73 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 MIR1302-1-201ENST00000637932 143 ntBASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.12□□□□□ -2.43
ECHDC3Q96DC8 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 SNORD114-31-201ENST00000363219 75 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 PCNPP3-201ENST00000393579 471 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 AF228730.3-201ENST00000436691 102 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 SNORD19B-201ENST00000459623 84 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 FGF7P4-201ENST00000509595 295 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 RNA5SP47-201ENST00000517230 109 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 AC100767.1-201ENST00000528178 123 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 AC141557.1-201ENST00000540982 400 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 MIR5688-201ENST00000580619 83 ntBASIC-0.13□□□□□ -2.43
ECHDC3Q96DC8 MIR367-201ENST00000362299 68 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 MIR526A2-201ENST00000390198 65 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 SNORD115-46-201ENST00000390982 71 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 AC096949.1-201ENST00000412047 152 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 AL138752.1-201ENST00000452964 351 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 RNU6-135P-201ENST00000516769 101 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 RNU6-365P-201ENST00000517113 106 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 AL662814.1-201ENST00000617364 121 ntBASIC-0.14□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNA5SP98-201ENST00000363158 137 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU6-127P-201ENST00000390897 107 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 MIR1302-11-201ENST00000408051 138 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 MIR1302-9-201ENST00000408365 138 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 MIR1302-10-201ENST00000408734 138 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU6-504P-201ENST00000516568 104 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 SNORA31.14-201ENST00000516728 116 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU6-765P-201ENST00000516916 99 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 MIR1302-2-201ENST00000607096 138 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 MIR6082-201ENST00000613604 109 ntBASIC-0.15□□□□□ -2.43
ECHDC3Q96DC8 RNU4-90P-201ENST00000362773 141 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 RNU6-653P-201ENST00000363074 106 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 U8.15-201ENST00000390947 134 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 PMCHL1-202ENST00000423102 261 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 IGLVI-20-201ENST00000519296 130 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 MIR4743-201ENST00000584576 69 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 MIR376A1-201ENST00000616574 68 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 MIR6759-201ENST00000638110 65 ntBASIC-0.16□□□□□ -2.44
ECHDC3Q96DC8 RNU6-187P-201ENST00000384139 106 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 RNU6-514P-201ENST00000384208 107 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 SNORD28-201ENST00000384706 75 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 MIR548H2-201ENST00000408874 88 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 MIR5589-201ENST00000579442 60 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 AC091304.10-201ENST00000641554 121 ntBASIC-0.17□□□□□ -2.44
ECHDC3Q96DC8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 SUMO1P3-201ENST00000439961 304 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 RBMX2P4-201ENST00000441256 376 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 AC007485.1-201ENST00000616755 206 ntBASIC-0.18□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 RNU6-597P-201ENST00000365620 102 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 RNU6-484P-201ENST00000384016 107 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 MIR610-201ENST00000385139 96 ntBASIC-0.19□□□□□ -2.44
ECHDC3Q96DC8 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms