Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 Y_RNA.572-201ENST00000384757 98 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 RNA5SP436-201ENST00000516020 115 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 AC131281.1-201ENST00000522984 164 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 MIR6515-201ENST00000619843 57 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 AC078938.1-201ENST00000620993 318 ntBASIC0.14□□□□□ -2.39
UFD1Q92890 Y_RNA.19-201ENST00000362462 99 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 Y_RNA.91-201ENST00000363042 107 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 Y_RNA.214-201ENST00000364201 112 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 Y_RNA.276-201ENST00000364732 109 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 Y_RNA.634-201ENST00000364811 113 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 Y_RNA.354-201ENST00000365448 111 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 RNU2-55P-201ENST00000411146 174 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 AC022028.1-201ENST00000412054 408 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 RNY3P15-201ENST00000516297 97 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 RNU6-1299P-201ENST00000516316 100 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 AC133485.4-201ENST00000561835 220 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 SNORA4-201ENST00000584302 138 ntBASIC0.13□□□□□ -2.39
UFD1Q92890 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.13□□□□□ -2.39
UFD1Q92890 MIR342-201ENST00000362212 99 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 RNU6-484P-201ENST00000384016 107 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 RNU6-211P-201ENST00000384047 107 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 MIR626-201ENST00000385032 94 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 SNORA26.6-201ENST00000391256 115 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 SNORD93-201ENST00000408813 74 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 RNA5SP193-201ENST00000410353 107 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 RNU2-70P-201ENST00000410718 179 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.12□□□□□ -2.39
UFD1Q92890 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.12□□□□□ -2.39
UFD1Q92890 RNU6-988P-201ENST00000519081 107 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.12□□□□□ -2.39
UFD1Q92890 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 MIR6717-201ENST00000622747 73 ntBASIC0.12□□□□□ -2.39
UFD1Q92890 Y_RNA.16-201ENST00000362421 102 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 Y_RNA.116-201ENST00000363292 103 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 RNU6-806P-201ENST00000365147 105 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 RNU6-474P-201ENST00000384243 107 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 RNU6-863P-201ENST00000515989 104 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 RNA5SP153-201ENST00000516498 76 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 AP001282.2-201ENST00000616149 309 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 MIR8066-201ENST00000617280 78 ntBASIC0.11□□□□□ -2.39
UFD1Q92890 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.11□□□□□ -2.39
UFD1Q92890 MIR302B-201ENST00000362188 73 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 Y_RNA.26-201ENST00000362539 101 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 Y_RNA.42-201ENST00000362660 108 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 SNORA36.1-201ENST00000363424 132 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 SNORD114-23-201ENST00000363536 72 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 Y_RNA.210-201ENST00000364161 110 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNU6-740P-201ENST00000364734 105 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 Y_RNA.432-201ENST00000384087 111 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 MIR518E-201ENST00000385252 88 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNA5SP261-201ENST00000410536 106 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNU4-83P-201ENST00000410863 133 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNU7-45P-201ENST00000459460 63 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 SERF1AP1-201ENST00000514575 187 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 AC097639.2-201ENST00000603159 172 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 AC022709.1-201ENST00000615967 87 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 AL589743.1-201ENST00000551932 2712 ntBASIC0.1□□□□□ -2.39
UFD1Q92890 RNU6-653P-201ENST00000363074 106 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 Y_RNA.304-201ENST00000365011 112 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RNY3P5-201ENST00000384127 102 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 Y_RNA.455-201ENST00000384230 98 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RNU6-1289P-201ENST00000384431 106 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RPL39P25-201ENST00000449384 154 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RNU6-1143P-201ENST00000516125 104 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 RNU6-469P-201ENST00000516253 101 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 AP003327.1-201ENST00000529684 127 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 AL662814.1-201ENST00000617364 121 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
UFD1Q92890 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.64-201ENST00000362845 102 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.84-201ENST00000363011 104 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.275-201ENST00000364726 110 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.351-201ENST00000365436 96 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.509-201ENST00000384506 99 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 RNA5SP237-201ENST00000410414 113 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.617-201ENST00000410920 90 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.622-201ENST00000411091 108 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.08□□□□□ -2.4
UFD1Q92890 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
UFD1Q92890 Y_RNA.152-201ENST00000363578 100 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 Y_RNA.269-201ENST00000364685 89 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 SNORA22B-201ENST00000383876 138 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 SNORA1-201ENST00000384107 130 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 MIR598-201ENST00000384868 97 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 MIR644A-201ENST00000385262 94 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 MT-TT-201ENST00000387460 66 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 AL512326.2-201ENST00000426359 151 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.07□□□□□ -2.4
UFD1Q92890 SNRPGP8-201ENST00000454064 226 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 RNU6-1338P-201ENST00000516328 91 ntBASIC0.07□□□□□ -2.4
UFD1Q92890 SNORA62.5-201ENST00000516634 120 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 220.5 ms