Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU7-43P-201ENST00000516554 64 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 AC015712.3-201ENST00000559380 164 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 MIR3198-2-201ENST00000577868 80 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 AC025166.1-201ENST00000612411 163 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 MIR8074-201ENST00000615081 81 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 AL596211.1-201ENST00000569873 2277 ntBASIC1.94□□□□□ -2.1
ERCC4Q92889 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ERCC4Q92889 RNU6-690P-201ENST00000365242 106 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 SNORA70.7-201ENST00000384159 133 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 RNU6-1064P-201ENST00000410626 104 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 RNU7-73P-201ENST00000458743 63 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 RNU2-11P-201ENST00000459191 187 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 SNORD33.1-201ENST00000516213 88 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 MIR3683-201ENST00000580847 82 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 MIR4791-201ENST00000607666 84 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 MIR6845-201ENST00000613182 61 ntBASIC1.93□□□□□ -2.1
ERCC4Q92889 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
ERCC4Q92889 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 Y_RNA.346-201ENST00000365385 112 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 RNU6-1056P-201ENST00000383996 107 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 SNORD20-201ENST00000384550 80 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 RNU6-476P-201ENST00000384726 107 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 AC008834.1-201ENST00000511612 175 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 RNU6-548P-201ENST00000517083 115 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 HSPE1P19-201ENST00000603327 295 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
ERCC4Q92889 MTND5P18-201ENST00000445624 1801 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 RNU6-429P-201ENST00000384582 108 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 SNORD41-201ENST00000386967 70 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 MIR764-201ENST00000390811 85 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 SNX2P2-201ENST00000424553 323 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 HMGN2P23-201ENST00000456759 269 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 RNU6-970P-201ENST00000516312 107 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 MIR4764-201ENST00000580680 88 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 AC243994.1-201ENST00000618627 109 ntBASIC1.91□□□□□ -2.1
ERCC4Q92889 RNA5SP259-201ENST00000365541 109 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 SNORA26.6-201ENST00000391256 115 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 COX6CP6-201ENST00000490840 228 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 RNU6-322P-201ENST00000516010 103 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 RNU7-53P-201ENST00000516705 60 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 MIR4285-201ENST00000581001 85 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 MIR4305-201ENST00000583252 102 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 AL513534.2-201ENST00000603836 250 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 AC021443.1-201ENST00000604478 211 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 AC021613.1-201ENST00000623880 111 ntBASIC1.9□□□□□ -2.11
ERCC4Q92889 MIR342-201ENST00000362212 99 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-1325P-201ENST00000364905 105 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 Y_RNA.298-201ENST00000364960 107 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 MIR570-201ENST00000384917 97 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-1319P-201ENST00000390855 104 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-913P-201ENST00000390913 95 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-747P-201ENST00000390928 104 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-241P-201ENST00000391148 104 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 MIR1263-201ENST00000408324 86 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-177P-201ENST00000411257 104 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNY4P20-201ENST00000516678 93 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 RNU6-958P-201ENST00000516995 106 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
ERCC4Q92889 AL670379.3-201ENST00000605040 251 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 AL353997.5-201ENST00000618886 171 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 AC008133.2-201ENST00000624540 351 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 MIR6841-201ENST00000637129 72 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 WWP1P1-201ENST00000466609 2769 ntBASIC1.89□□□□□ -2.11
ERCC4Q92889 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.88□□□□□ -2.11
ERCC4Q92889 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ERCC4Q92889 Y_RNA.528-201ENST00000384575 108 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNU6-1067P-201ENST00000384752 107 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 AL451046.2-201ENST00000403074 277 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNA5SP144-201ENST00000410846 116 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 POLR2J4-204ENST00000418424 324 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNU7-67P-201ENST00000459003 62 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNU7-123P-201ENST00000515911 60 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNA5SP458-201ENST00000516188 119 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 RNU2-35P-201ENST00000516446 142 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 AL020996.3-201ENST00000606617 222 ntBASIC1.88□□□□□ -2.11
ERCC4Q92889 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
ERCC4Q92889 MIR302B-201ENST00000362188 73 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 Y_RNA.198-201ENST00000364013 98 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 Y_RNA.430-201ENST00000384081 110 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 MIR520C-201ENST00000385005 87 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.87□□□□□ -2.11
ERCC4Q92889 RNU7-164P-201ENST00000459221 62 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 snoU13.16-201ENST00000459350 104 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 RNU6-589P-201ENST00000516485 107 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 MIR8055-201ENST00000610739 97 ntBASIC1.87□□□□□ -2.11
ERCC4Q92889 RNU4-16P-201ENST00000364737 141 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 SNORA51.10-201ENST00000384418 136 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 MIR934-201ENST00000401241 83 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 RNU7-45P-201ENST00000459460 63 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 AC005908.1-201ENST00000468701 347 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 RNU6-919P-201ENST00000516731 104 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 DNAJC19P9-201ENST00000555084 351 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ERCC4Q92889 MIR6129-201ENST00000616087 109 ntBASIC1.86□□□□□ -2.11
ERCC4Q92889 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms