Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC098614.3-201ENST00000438957 440 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 HSPE1P25-201ENST00000455484 251 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 FGF7P4-201ENST00000509595 295 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 RNU6-475P-201ENST00000516073 104 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 RNU6-126P-201ENST00000516685 103 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 AL132765.2-201ENST00000610812 351 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 MIR6717-201ENST00000622747 73 ntBASIC-0.08□□□□□ -2.42
LMX1AQ8TE12 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 RNU6-929P-201ENST00000384429 107 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 MIR593-201ENST00000384856 100 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 MIR145-201ENST00000384967 88 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 MIR548I3-201ENST00000408378 149 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AF228730.3-201ENST00000436691 102 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 RNU2-11P-201ENST00000459191 187 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 RNU6-397P-201ENST00000516226 104 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 RNA5SP47-201ENST00000517230 109 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AC100767.1-201ENST00000528178 123 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AP003733.2-201ENST00000529409 171 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 AP001282.2-201ENST00000616149 309 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 uc_338.22-201ENST00000622722 187 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 MIR499B-201ENST00000636498 73 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 MIR376A2-201ENST00000636782 80 ntBASIC-0.09□□□□□ -2.42
LMX1AQ8TE12 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-161P-201ENST00000363051 106 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 MIR526A2-201ENST00000390198 65 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 SNORD115-46-201ENST00000390982 71 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU4-83P-201ENST00000410863 133 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU7-45P-201ENST00000459460 63 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 MRPS35P2-201ENST00000508242 191 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-976P-201ENST00000516086 111 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 SNORA31.14-201ENST00000516728 116 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-135P-201ENST00000516769 101 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 RNU6-365P-201ENST00000517113 106 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 AC040926.1-201ENST00000530195 238 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 MIR4724-201ENST00000579485 89 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 SNORD113-8-201ENST00000363497 74 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 RNU6-102P-201ENST00000384485 104 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 MIR1302-11-201ENST00000408051 138 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 MIR1302-9-201ENST00000408365 138 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 MIR1302-10-201ENST00000408734 138 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 SNORD93-201ENST00000408813 74 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 SNORD19B-201ENST00000459623 84 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 RNU6-765P-201ENST00000516916 99 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 MIR1302-2-201ENST00000607096 138 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 MIR6082-201ENST00000613604 109 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 U6atac.1-201ENST00000616025 117 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 AL662814.1-201ENST00000617364 121 ntBASIC-0.11□□□□□ -2.43
LMX1AQ8TE12 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNA5SP245-201ENST00000364239 121 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 MIR501-201ENST00000390204 84 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 MIR760-201ENST00000390220 80 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 U8.15-201ENST00000390947 134 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU2-55P-201ENST00000411146 174 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 PMCHL1-202ENST00000423102 261 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 AL138752.1-201ENST00000452964 351 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU7-129P-201ENST00000516128 62 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 RNU6-469P-201ENST00000516253 101 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 MTND5P34-201ENST00000568888 325 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 AL133255.1-201ENST00000606374 441 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 SNORA70.25-201ENST00000612741 95 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 MIR1302-1-201ENST00000637932 143 ntBASIC-0.12□□□□□ -2.43
LMX1AQ8TE12 MIR367-201ENST00000362299 68 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 RNU4-90P-201ENST00000362773 141 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 RNU6-653P-201ENST00000363074 106 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.13□□□□□ -2.43
LMX1AQ8TE12 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms