Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR548AE2-201ENST00000583456 67 ntBASIC2.18□□□□□ -2.06
NUP43Q8NFH3 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
NUP43Q8NFH3 AC245884.12-201ENST00000615364 59 ntBASIC2.18□□□□□ -2.06
NUP43Q8NFH3 ZNF658B-202ENST00000615961 3375 ntBASIC2.18□□□□□ -2.06
NUP43Q8NFH3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNY3P2-201ENST00000362918 102 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.107-201ENST00000363190 121 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNU4-67P-201ENST00000364569 141 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.558-201ENST00000384685 113 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNY1P7-201ENST00000384743 110 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNU7-193P-201ENST00000516723 65 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNA5SP402-201ENST00000517148 110 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 MIR4694-201ENST00000578534 80 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 MIR2052-201ENST00000636055 55 ntBASIC2.17□□□□□ -2.06
NUP43Q8NFH3 RNU4-36P-201ENST00000364294 144 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.342-201ENST00000365352 113 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.360-201ENST00000365512 102 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.537-201ENST00000384626 109 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 MIR577-201ENST00000385196 96 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 RPS3AP1-201ENST00000413190 320 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 SCARNA23-201ENST00000516060 130 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 RNU6-762P-201ENST00000517107 102 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 SNORA74.3-201ENST00000517108 154 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 FAM106DP-201ENST00000586416 501 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 AL442128.1-201ENST00000615151 90 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 MALAT1.1-201ENST00000618249 95 ntBASIC2.16□□□□□ -2.06
NUP43Q8NFH3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
NUP43Q8NFH3 Y_RNA.155-201ENST00000363632 101 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RNA5SP261-201ENST00000410536 106 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RNU6-733P-201ENST00000410759 104 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RPL23AP6-201ENST00000446637 472 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RNA5SP33-201ENST00000516687 98 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 RNU6-844P-201ENST00000517175 102 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 MIR5007-201ENST00000583098 95 ntBASIC2.15□□□□□ -2.07
NUP43Q8NFH3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.15□□□□□ -2.07
NUP43Q8NFH3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.14□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.220-201ENST00000364244 109 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RNU6-409P-201ENST00000384114 104 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RNU6-616P-201ENST00000384353 107 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 MIR605-201ENST00000385078 83 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RNU6-679P-201ENST00000391003 106 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 SNORA3.2-201ENST00000408221 125 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.601-201ENST00000410500 113 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 HMGN1P33-201ENST00000432945 451 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RNU6-917P-201ENST00000516294 104 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
NUP43Q8NFH3 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
NUP43Q8NFH3 RNU6-832P-201ENST00000363319 107 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 RNU6-203P-201ENST00000384038 104 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 RNU6-360P-201ENST00000390944 104 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 RNY4P29-201ENST00000410801 97 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 MIR4529-201ENST00000578110 78 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 FAM71BP1-201ENST00000604431 523 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 MIR8055-201ENST00000610739 97 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.13□□□□□ -2.07
NUP43Q8NFH3 MIRLET7G-201ENST00000362280 84 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.388-201ENST00000383919 113 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 RNA5SP425-201ENST00000410336 112 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 snoU13.16-201ENST00000459350 104 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
NUP43Q8NFH3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NUP43Q8NFH3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
NUP43Q8NFH3 RNA5SP289-201ENST00000362332 137 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.10-201ENST00000362371 110 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 MIR194-1-201ENST00000384892 85 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 SNORD77B-201ENST00000391112 67 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 SNORA7.5-201ENST00000410672 110 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.11□□□□□ -2.07
NUP43Q8NFH3 RNU7-43P-201ENST00000516554 64 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 RNA5SP82-201ENST00000516707 92 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 AC015712.3-201ENST00000559380 164 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 AC012531.4-201ENST00000616509 177 ntBASIC2.11□□□□□ -2.07
NUP43Q8NFH3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NUP43Q8NFH3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP43Q8NFH3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP43Q8NFH3 SNORA32-201ENST00000384072 121 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 SNORA26.2-201ENST00000390922 122 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 AC096949.1-201ENST00000412047 152 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.1□□□□□ -2.07
NUP43Q8NFH3 AC108210.2-201ENST00000503681 201 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 MIR4648-201ENST00000580107 72 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 MIR4764-201ENST00000580680 88 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 AC008133.2-201ENST00000624540 351 ntBASIC2.1□□□□□ -2.07
NUP43Q8NFH3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
NUP43Q8NFH3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
NUP43Q8NFH3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
NUP43Q8NFH3 RNU6-170P-201ENST00000362832 104 ntBASIC2.09□□□□□ -2.07
NUP43Q8NFH3 Y_RNA.377-201ENST00000365644 108 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms