Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SNORD115-40-201ENST00000606510 82 ntBASIC2.04□□□□□ -2.08
SHCBP1Q8NEM2 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.04□□□□□ -2.08
SHCBP1Q8NEM2 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
SHCBP1Q8NEM2 AL035470.1-201ENST00000622571 220 ntBASIC2.04□□□□□ -2.08
SHCBP1Q8NEM2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU6-1298P-201ENST00000362456 101 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 Y_RNA.85-201ENST00000363014 111 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU4-16P-201ENST00000364737 141 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU6-1107P-201ENST00000364817 104 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 MIR452-201ENST00000385020 85 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 MIR1267-201ENST00000408723 78 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU7-164P-201ENST00000459221 62 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RPS29P24-201ENST00000486345 171 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU7-123P-201ENST00000515911 60 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNU6-412P-201ENST00000516434 106 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 RNA5SP481-201ENST00000516814 122 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 MIR4305-201ENST00000583252 102 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 AL513423.1-201ENST00000621695 132 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
SHCBP1Q8NEM2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
SHCBP1Q8NEM2 MIR450A1-201ENST00000362262 91 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-106P-201ENST00000384405 107 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-1104P-201ENST00000384723 104 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 MIR660-201ENST00000385235 97 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU4-62P-201ENST00000410125 130 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-321P-201ENST00000410912 106 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU7-96P-201ENST00000459535 64 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNU2-35P-201ENST00000516446 142 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 RNA5SP364-201ENST00000516938 78 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 AC022523.2-201ENST00000561045 150 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 MIR4778-201ENST00000577635 80 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 MIR4679-2-201ENST00000578358 77 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 MIR502-201ENST00000606349 86 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 WWP1P1-201ENST00000466609 2769 ntBASIC2.02□□□□□ -2.09
SHCBP1Q8NEM2 Y_RNA.213-201ENST00000364178 111 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 SNORA16.1-201ENST00000364597 132 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 MIR526A1-201ENST00000384897 85 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-554P-201ENST00000410466 106 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 AP1B1P2-201ENST00000416196 106 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 PGBD4P5-201ENST00000445958 426 ntBASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
SHCBP1Q8NEM2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2□□□□□ -2.09
SHCBP1Q8NEM2 RNA5SP276-201ENST00000362580 94 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 MIR136-201ENST00000385207 82 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 RNA5SP212-201ENST00000391223 107 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 RNA5SP89-201ENST00000410300 108 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 AL035398.1-201ENST00000430869 322 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 AL031737.1-201ENST00000450125 223 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 RNU2-11P-201ENST00000459191 187 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-168P-201ENST00000516189 101 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 SNORA31.17-201ENST00000516953 127 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 AL773524.1-201ENST00000614065 229 ntBASIC2□□□□□ -2.09
SHCBP1Q8NEM2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 SNORA63.5-201ENST00000363548 123 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 RNU6-414P-201ENST00000363705 104 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 Y_RNA.362-201ENST00000365518 110 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 SNORD28B-201ENST00000390993 75 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 SNORD3E-202ENST00000627253 216 ntBASIC1.99□□□□□ -2.09
SHCBP1Q8NEM2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 MIR424-201ENST00000362227 98 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 Y_RNA.118-201ENST00000363300 101 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 RNY4P6-201ENST00000363667 96 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 SNORA1.2-201ENST00000365189 134 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 Y_RNA.370-201ENST00000365589 108 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 RNA5SP144-201ENST00000410846 116 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 TRMT112P2-201ENST00000512910 132 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 AL359821.1-201ENST00000605519 182 ntBASIC1.98□□□□□ -2.09
SHCBP1Q8NEM2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 MIR302B-201ENST00000362188 73 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 MIR759-201ENST00000390224 91 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 RNU7-45P-201ENST00000459460 63 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 AC107297.1-201ENST00000459991 176 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 RNU2-13P-201ENST00000515909 113 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 MIR4303-201ENST00000581299 66 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 AC021613.1-201ENST00000623880 111 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
SHCBP1Q8NEM2 AL589743.1-201ENST00000551932 2712 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RNY1P10-201ENST00000363268 113 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.344-201ENST00000365381 112 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-32P-201ENST00000383948 107 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-13P-201ENST00000384248 107 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 Y_RNA.495-201ENST00000384435 112 ntBASIC1.96□□□□□ -2.1
SHCBP1Q8NEM2 RNU6-12P-201ENST00000384604 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms