Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 MIR5706-201ENST00000579841 80 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 AC092447.9-201ENST00000603395 144 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 AL162376.1-201ENST00000624117 175 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 AL596211.1-201ENST00000569873 2277 ntBASIC-0.52□□□□□ -2.49
CCDC112Q8NEF3 SNORA72.6-201ENST00000384520 129 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 snoU13.19-201ENST00000459148 104 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 RNU6-475P-201ENST00000516073 104 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 SNORA25.16-201ENST00000516741 121 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 VN1R91P-201ENST00000594377 169 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 AC011921.3-201ENST00000605540 361 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.53□□□□□ -2.49
CCDC112Q8NEF3 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNY4P3-201ENST00000365254 95 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNU6-949P-201ENST00000384040 107 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 MTND4LP11-201ENST00000422184 280 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNU6-191P-201ENST00000516295 94 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNU7-30P-201ENST00000516835 62 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 AC100767.1-201ENST00000528178 123 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 MIR4677-201ENST00000584153 80 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 AL442067.1-201ENST00000613261 223 ntBASIC-0.54□□□□□ -2.5
CCDC112Q8NEF3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNU6-937P-201ENST00000384325 106 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNU6-763P-201ENST00000390865 106 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNA5SP300-201ENST00000391197 107 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNU6-370P-201ENST00000411008 104 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 AC096531.1-201ENST00000419107 107 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 AC108059.2-201ENST00000434626 151 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 MTND4P17-201ENST00000470444 350 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 RNU2-60P-201ENST00000517290 128 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 AP003072.1-201ENST00000531740 145 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 MIR3666-201ENST00000607845 111 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 U4.5-201ENST00000617137 123 ntBASIC-0.55□□□□□ -2.5
CCDC112Q8NEF3 MIR342-201ENST00000362212 99 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 RNU6-21P-201ENST00000384710 107 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 MIR559-201ENST00000385188 96 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 RNA5SP261-201ENST00000410536 106 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 MTND1P34-201ENST00000438556 671 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 AC099799.1-201ENST00000439809 192 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 CR383656.4-201ENST00000546909 122 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 MIR5690-201ENST00000583739 73 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 U7.6-201ENST00000610841 64 ntBASIC-0.56□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 SNORA22B-201ENST00000383876 138 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 MTCO2P24-201ENST00000515611 426 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 RNU6-397P-201ENST00000516226 104 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 RNU6-365P-201ENST00000517113 106 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 AC138749.4-201ENST00000563970 127 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 uc_338.28-201ENST00000612082 187 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 AC002553.4-201ENST00000616896 331 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 MIR6514-201ENST00000622549 70 ntBASIC-0.57□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 RNU6-490P-201ENST00000362985 107 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 SNORA63.5-201ENST00000363548 123 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 RPL21P38-201ENST00000418090 167 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 RNU6-764P-201ENST00000516396 105 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 RNU6-897P-201ENST00000517135 105 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 AL121655.1-201ENST00000605811 308 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 AC013791.1-201ENST00000616619 62 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 MIR4272-201ENST00000635924 64 ntBASIC-0.58□□□□□ -2.5
CCDC112Q8NEF3 MIR302B-201ENST00000362188 73 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 RNU4-24P-201ENST00000364565 139 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 RNY3-201ENST00000365484 102 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 RPS29P8-201ENST00000445109 171 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 RNU6-699P-201ENST00000517081 110 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 AP003733.2-201ENST00000529409 171 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 MIR378D2-201ENST00000580636 98 ntBASIC-0.59□□□□□ -2.5
CCDC112Q8NEF3 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 SNORD115-24-201ENST00000363528 82 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 RNY1P13-201ENST00000365030 105 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 MTND1P14-201ENST00000427400 950 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 SEPT14P8-201ENST00000508026 178 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 RNU6-126P-201ENST00000516685 103 ntBASIC-0.6□□□□□ -2.51
CCDC112Q8NEF3 AC006157.1-201ENST00000611750 366 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms