Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 snoU13.27-201ENST00000459278 104 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-80P-201ENST00000459562 61 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-123P-201ENST00000515911 60 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 AC090821.2-201ENST00000523552 176 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 MIR3935-201ENST00000583472 104 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 AC021443.1-201ENST00000604478 211 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 uc_338.28-201ENST00000612082 187 ntBASIC1.87□□□□□ -2.11
SLC44A3Q8N4M1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.85-201ENST00000363014 111 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.241-201ENST00000364470 117 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 AC093850.1-201ENST00000454121 251 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-96P-201ENST00000459535 64 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-12P-201ENST00000516030 62 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNU2-35P-201ENST00000516446 142 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-181P-201ENST00000517234 74 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 MIR4709-201ENST00000577272 72 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 MIR4679-2-201ENST00000578358 77 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 HSPE1P19-201ENST00000603327 295 ntBASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SLC44A3Q8N4M1 Y_RNA.454-201ENST00000384224 113 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-106P-201ENST00000384405 107 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 MIR452-201ENST00000385020 85 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 MIR516B2-201ENST00000385190 85 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 U8.17-201ENST00000391292 132 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 RNU7-34P-201ENST00000459394 64 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 RPS29P24-201ENST00000486345 171 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 RNU2-13P-201ENST00000515909 113 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
SLC44A3Q8N4M1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 AL596211.1-201ENST00000569873 2277 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 SNORA24-201ENST00000384096 131 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-1104P-201ENST00000384723 104 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 SNORD12C-201ENST00000386307 89 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 RNU6-554P-201ENST00000410466 106 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 PGBD4P5-201ENST00000445958 426 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 SNORA31.17-201ENST00000516953 127 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 SUMO2P16-201ENST00000519475 264 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 DNAJC19P9-201ENST00000555084 351 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 AC022523.2-201ENST00000561045 150 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 MIR4305-201ENST00000583252 102 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 MIR502-201ENST00000606349 86 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 U1.36-201ENST00000620684 176 ntBASIC1.84□□□□□ -2.11
SLC44A3Q8N4M1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
SLC44A3Q8N4M1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.84□□□□□ -2.12
SLC44A3Q8N4M1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 MIR424-201ENST00000362227 98 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU4-16P-201ENST00000364737 141 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-1107P-201ENST00000364817 104 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 SUMO2P12-201ENST00000405924 140 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 MIR1267-201ENST00000408723 78 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU2-7P-201ENST00000410794 178 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU7-164P-201ENST00000459221 62 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-412P-201ENST00000516434 106 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU7-70P-201ENST00000516941 66 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 RNA5SP89-201ENST00000410300 108 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 RNA5SP144-201ENST00000410846 116 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 SNX2P2-201ENST00000424553 323 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 MIR4778-201ENST00000577635 80 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 AL512598.1-201ENST00000610158 273 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 AL627230.6-201ENST00000611129 280 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
SLC44A3Q8N4M1 MIR450A1-201ENST00000362262 91 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.213-201ENST00000364178 111 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.224-201ENST00000364308 111 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.323-201ENST00000365157 109 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 MIR136-201ENST00000385207 82 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 SNORD28B-201ENST00000390993 75 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 AL035398.1-201ENST00000430869 322 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-168P-201ENST00000516189 101 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 AC012493.3-201ENST00000604494 112 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 BX248123.2-201ENST00000606318 124 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 RNU6-94P-201ENST00000607728 107 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 AC021613.1-201ENST00000623880 111 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 MIR6841-201ENST00000637129 72 ntBASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SLC44A3Q8N4M1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 MIR194-1-201ENST00000384892 85 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 MIR7-2-201ENST00000384970 110 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 SNORA26.6-201ENST00000391256 115 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 POLR2J4-204ENST00000418424 324 ntBASIC1.8□□□□□ -2.12
SLC44A3Q8N4M1 AL031737.1-201ENST00000450125 223 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms