Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR4514-201ENST00000581410 57 ntBASIC0.1□□□□□ -2.39
NUDCD3Q8IVD9 AC006006.1-201ENST00000603082 144 ntBASIC0.1□□□□□ -2.39
NUDCD3Q8IVD9 AC037487.3-201ENST00000606668 112 ntBASIC0.1□□□□□ -2.39
NUDCD3Q8IVD9 AC010487.4-201ENST00000637027 61 ntBASIC0.1□□□□□ -2.39
NUDCD3Q8IVD9 MIR342-201ENST00000362212 99 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.24-201ENST00000362508 103 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 SNORA36.1-201ENST00000363424 132 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-326P-201ENST00000365480 107 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 MIR215-201ENST00000384858 110 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 MIR548S-201ENST00000581352 82 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 RN7SL793P-201ENST00000583259 296 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 MIR8066-201ENST00000617280 78 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 PVT1_3.1-201ENST00000620853 95 ntBASIC0.09□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.91-201ENST00000363042 107 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.229-201ENST00000364347 113 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-740P-201ENST00000364734 105 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 SNORD42.2-201ENST00000365570 69 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.389-201ENST00000383924 113 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 RNY1P4-201ENST00000384595 115 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 SNORD93-201ENST00000408813 74 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-101P-201ENST00000410323 104 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 RNU4-83P-201ENST00000410863 133 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.617-201ENST00000410920 90 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 RNU7-45P-201ENST00000459460 63 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.673-201ENST00000516306 88 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 SNORA27.4-201ENST00000516650 95 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 SNORA40.15-201ENST00000516884 107 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 AC069113.3-201ENST00000521019 150 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 MIR5688-201ENST00000580619 83 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.804-201ENST00000615262 101 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 AP001282.2-201ENST00000616149 309 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 MIR6717-201ENST00000622747 73 ntBASIC0.08□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-1189P-201ENST00000383958 107 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.419-201ENST00000384041 102 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 MIR644A-201ENST00000385262 94 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 SNORA26.6-201ENST00000391256 115 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 RPL21P38-201ENST00000418090 167 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 AL731563.1-201ENST00000442202 214 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.393-201ENST00000383936 102 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.410-201ENST00000383992 113 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 SNORA8.3-201ENST00000384679 139 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 ELOCP20-201ENST00000422460 345 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-1299P-201ENST00000516316 100 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.721-201ENST00000517207 102 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 AC112693.2-201ENST00000556538 232 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
NUDCD3Q8IVD9 MIR302B-201ENST00000362188 73 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.634-201ENST00000364811 113 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-806P-201ENST00000365147 105 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-484P-201ENST00000384016 107 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 SNORA26-201ENST00000391286 122 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-469P-201ENST00000516253 101 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 SNORA62.5-201ENST00000516634 120 ntBASIC0.05□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.16-201ENST00000362421 102 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.19-201ENST00000362462 99 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-770P-201ENST00000363929 105 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.214-201ENST00000364201 112 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-597P-201ENST00000365620 102 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-211P-201ENST00000384047 107 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNY3P14-201ENST00000384309 102 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 MIR626-201ENST00000385032 94 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 MT-TD-201ENST00000387419 68 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNA5SP237-201ENST00000410414 113 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNU2-59P-201ENST00000410482 191 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 AL512326.2-201ENST00000426359 151 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RPL39P25-201ENST00000449384 154 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 RNY3P15-201ENST00000516297 97 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 AP003327.1-201ENST00000529684 127 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 AL662814.1-201ENST00000617364 121 ntBASIC0.04□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.13-201ENST00000362403 112 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.26-201ENST00000362539 101 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.28-201ENST00000362554 111 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 RNU6-653P-201ENST00000363074 106 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.304-201ENST00000365011 112 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 MIR489-201ENST00000384923 84 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 RNU2-55P-201ENST00000411146 174 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 RNA5SP268-201ENST00000516828 124 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 MIR376A2-201ENST00000636782 80 ntBASIC0.03□□□□□ -2.4
NUDCD3Q8IVD9 UBE2WP1-201ENST00000362030 340 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 RNU6-403P-201ENST00000363163 104 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.432-201ENST00000384087 111 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 SNORA1-201ENST00000384107 130 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 MIR193B-201ENST00000384907 83 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 MT-TT-201ENST00000387460 66 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.622-201ENST00000411091 108 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 RNA5SP153-201ENST00000516498 76 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 AC023932.2-201ENST00000603176 175 ntBASIC0.02□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.431-201ENST00000384086 102 ntBASIC0.01□□□□□ -2.41
NUDCD3Q8IVD9 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms