Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AL035470.1-201ENST00000622571 220 ntBASIC2.36□□□□□ -2.03
USP48Q86UV5 AC106754.2-201ENST00000623006 233 ntBASIC2.36□□□□□ -2.03
USP48Q86UV5 MIR450A1-201ENST00000362262 91 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-34-201ENST00000362441 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-12-201ENST00000362583 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-29-201ENST00000362834 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-9-201ENST00000362912 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-21-201ENST00000362963 81 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 Y_RNA.85-201ENST00000363014 111 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-14-201ENST00000363090 81 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-13-201ENST00000363358 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-41-201ENST00000363608 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-11-201ENST00000363616 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-5-201ENST00000363633 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-39-201ENST00000363694 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-4-201ENST00000363810 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-16-201ENST00000363887 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-6-201ENST00000363942 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 Y_RNA.198-201ENST00000364013 98 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-42-201ENST00000364273 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 Y_RNA.241-201ENST00000364470 117 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-15-201ENST00000364809 81 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-1-201ENST00000364961 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-26-201ENST00000365067 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-10-201ENST00000365073 81 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-43-201ENST00000365503 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 RNA5SP259-201ENST00000365541 109 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-36-201ENST00000365629 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 RNU4-52P-201ENST00000384209 138 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 RNU4-62P-201ENST00000410125 130 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.35□□□□□ -2.03
USP48Q86UV5 RNU7-181P-201ENST00000517234 74 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 MIR3935-201ENST00000583472 104 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 SNORD115-40-201ENST00000606510 82 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 AC091932.4-201ENST00000623386 200 ntBASIC2.35□□□□□ -2.03
USP48Q86UV5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP48Q86UV5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USP48Q86UV5 RNU6-1107P-201ENST00000364817 104 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 RNU6-690P-201ENST00000365242 106 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
USP48Q86UV5 RNU6-554P-201ENST00000410466 106 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 AP1B1P2-201ENST00000416196 106 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 SNORA25.15-201ENST00000516487 89 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 RNU7-70P-201ENST00000516941 66 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 RNA5SP170-201ENST00000517150 101 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 MIR5089-201ENST00000580047 84 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 MIR4448-201ENST00000584360 86 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 AL359821.1-201ENST00000605519 182 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 MIR8081-201ENST00000611533 95 ntBASIC2.34□□□□□ -2.03
USP48Q86UV5 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP48Q86UV5 Y_RNA.43-201ENST00000362670 111 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 RNU1-133P-201ENST00000364867 167 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 Y_RNA.298-201ENST00000364960 107 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 RNY1P6-201ENST00000384193 109 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 SNORA27-201ENST00000384323 126 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 MIR489-201ENST00000384923 84 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 SNORD12C-201ENST00000386307 89 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 SNORD123-201ENST00000459473 70 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 AC107297.1-201ENST00000459991 176 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 RNU6-322P-201ENST00000516010 103 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 RNU2-35P-201ENST00000516446 142 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 AC103810.8-201ENST00000607347 118 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.33□□□□□ -2.04
USP48Q86UV5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.33□□□□□ -2.04
USP48Q86UV5 SNORA25.9-201ENST00000365087 128 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 SUMO2P12-201ENST00000405924 140 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 RNU7-80P-201ENST00000459562 61 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 RNU7-123P-201ENST00000515911 60 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 RNU6-917P-201ENST00000516294 104 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 RNA5SP364-201ENST00000516938 78 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 AC090821.2-201ENST00000523552 176 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 AC022523.2-201ENST00000561045 150 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 SNORA77B-201ENST00000578179 125 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 MIR3683-201ENST00000580847 82 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 AC021443.1-201ENST00000604478 211 ntBASIC2.32□□□□□ -2.04
USP48Q86UV5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
USP48Q86UV5 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.31□□□□□ -2.04
USP48Q86UV5 Y_RNA.370-201ENST00000365589 108 ntBASIC2.31□□□□□ -2.04
USP48Q86UV5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
USP48Q86UV5 AL596211.1-201ENST00000569873 2277 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 RNY1P10-201ENST00000363268 113 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 RNU6-1255P-201ENST00000363434 112 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 Y_RNA.309-201ENST00000365046 111 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 Y_RNA.454-201ENST00000384224 113 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 Y_RNA.495-201ENST00000384435 112 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 MIR653-201ENST00000385279 96 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 AL031737.1-201ENST00000450125 223 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 RNU7-164P-201ENST00000459221 62 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 SNORA74.3-201ENST00000517108 154 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 AC015688.6-201ENST00000577737 104 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.3□□□□□ -2.04
USP48Q86UV5 MIR4305-201ENST00000583252 102 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 MIR4679-1-201ENST00000637619 75 ntBASIC2.3□□□□□ -2.04
USP48Q86UV5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
USP48Q86UV5 Y_RNA.362-201ENST00000365518 110 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 SNORA70.7-201ENST00000384159 133 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.29□□□□□ -2.04
USP48Q86UV5 MIR30A-201ENST00000385092 71 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms