Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC046143.2-201ENST00000609789 160 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 MIR1291-201ENST00000627649 87 ntBASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
UBE3DQ7Z6J8 MRPL35P3-201ENST00000421557 364 ntBASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 MIR1270-201ENST00000459320 83 ntBASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 MIR4764-201ENST00000580680 88 ntBASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
UBE3DQ7Z6J8 SNORA3A-201ENST00000364113 130 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 MIR653-201ENST00000385279 96 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RNA5SP181-201ENST00000410246 98 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 SUMO1P4-201ENST00000429430 302 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RN7SKP12-201ENST00000516275 143 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-521P-201ENST00000516663 105 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RNA5SP402-201ENST00000517148 110 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RNU7-35P-201ENST00000517174 62 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
UBE3DQ7Z6J8 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 Y_RNA.95-201ENST00000363079 95 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-60P-201ENST00000364792 103 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 SNORD115-35-201ENST00000365122 82 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 Y_RNA.388-201ENST00000383919 113 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 MIR194-1-201ENST00000384892 85 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNA5SP57-201ENST00000459463 123 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNU7-61P-201ENST00000515897 61 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-917P-201ENST00000516294 104 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 Y_RNA.705-201ENST00000516862 110 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 RNU2-19P-201ENST00000517288 84 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 MIR8065-201ENST00000620577 100 ntBASIC2.25□□□□□ -2.05
UBE3DQ7Z6J8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 RNA5SP289-201ENST00000362332 137 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 Y_RNA.290-201ENST00000364879 114 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1134P-201ENST00000365156 101 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 MIR520C-201ENST00000385005 87 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AC004965.1-201ENST00000413033 213 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AL513328.1-201ENST00000446460 224 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AC234781.5-201ENST00000508429 271 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AC108729.3-201ENST00000513484 108 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 RNU7-2P-201ENST00000516096 62 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 RNU7-193P-201ENST00000516723 65 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 CYP3A52P-201ENST00000563326 91 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AC012531.4-201ENST00000616509 177 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AL590808.1-201ENST00000618696 141 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 AL512310.12-203ENST00000640543 90 ntBASIC2.24□□□□□ -2.05
UBE3DQ7Z6J8 SNORA32-201ENST00000384072 121 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 MIR144-201ENST00000384886 86 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-972P-201ENST00000391208 107 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1086P-201ENST00000410930 100 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 AC062037.1-201ENST00000605302 128 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 AC245884.12-201ENST00000615364 59 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 MIR6852-201ENST00000621699 66 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
UBE3DQ7Z6J8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 MIR634-201ENST00000385208 97 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 AL451046.2-201ENST00000403074 277 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-447P-201ENST00000410293 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1118P-201ENST00000410382 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1076P-201ENST00000410397 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-355P-201ENST00000410427 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-791P-201ENST00000410467 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-705P-201ENST00000410601 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1100P-201ENST00000410691 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-860P-201ENST00000410860 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-1217P-201ENST00000411276 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-785P-201ENST00000411324 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 HMGN1P33-201ENST00000432945 451 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 AC245047.7-201ENST00000440265 293 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 Y_RNA.659-201ENST00000515994 113 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 RNU6-795P-201ENST00000516323 103 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 AL137847.3-201ENST00000611521 109 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 U6.90-201ENST00000614007 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 U6.70-201ENST00000620287 104 ntBASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
UBE3DQ7Z6J8 AC080100.1-201ENST00000624239 5356 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNA5SP48-201ENST00000363969 126 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNU6-1152P-201ENST00000384576 107 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNU6-644P-201ENST00000391155 98 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNA5SP212-201ENST00000391223 107 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNU6-602P-201ENST00000411155 105 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 AL161935.2-201ENST00000414627 60 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNA5SP82-201ENST00000516707 92 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 MIR4777-201ENST00000583710 86 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 U7.3-201ENST00000616123 62 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 AP000648.3-201ENST00000623539 4507 ntBASIC2.21□□□□□ -2.06
UBE3DQ7Z6J8 RNU6-887P-201ENST00000410660 100 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms