Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 SNORA4.2-201ENST00000365313 147 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-409P-201ENST00000384114 104 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 RNU4-69P-201ENST00000410677 143 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 RNU2-11P-201ENST00000459191 187 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 RNA5SP395-201ENST00000516567 118 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 MIR4448-201ENST00000584360 86 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 FAM71BP1-201ENST00000604431 523 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 MIR6841-201ENST00000637129 72 ntBASIC2.15□□□□□ -2.07
LIMS2Q7Z4I7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-424P-201ENST00000384367 105 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 MIR605-201ENST00000385078 83 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-679P-201ENST00000391003 106 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-644P-201ENST00000391155 98 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 U8.16-201ENST00000391279 133 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AL451046.2-201ENST00000403074 277 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 MIR1267-201ENST00000408723 78 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 MIR1270-201ENST00000459320 83 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 snoU13.26-201ENST00000459452 105 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNU2-13P-201ENST00000515909 113 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 RNU7-181P-201ENST00000517234 74 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
LIMS2Q7Z4I7 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.155-201ENST00000363632 101 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.171-201ENST00000363760 102 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.377-201ENST00000365644 108 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 RNU4-52P-201ENST00000384209 138 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 MIR29C-201ENST00000385231 88 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 HSPE1P9-201ENST00000440046 311 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 RNU7-61P-201ENST00000515897 61 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-795P-201ENST00000516323 103 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 AC026271.5-201ENST00000577873 130 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 MIR4777-201ENST00000583710 86 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 AC069114.2-201ENST00000604699 304 ntBASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LIMS2Q7Z4I7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 SNORA24-201ENST00000384096 131 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 SNORA26.6-201ENST00000391256 115 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 RNU7-45P-201ENST00000459460 63 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 AC025033.1-201ENST00000463883 194 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-1018P-201ENST00000516577 106 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 RNA5SP168-201ENST00000516642 112 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 MIR548Z-201ENST00000584743 97 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 AL513534.2-201ENST00000603836 250 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 U7.3-201ENST00000616123 62 ntBASIC2.12□□□□□ -2.07
LIMS2Q7Z4I7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 RNA5SP160-201ENST00000364866 120 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.430-201ENST00000384081 110 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 U8.13-201ENST00000390842 128 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 AL034345.1-201ENST00000407768 123 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 HMGN2P3-201ENST00000433603 273 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 HMGN2P5-201ENST00000436882 273 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 AC069257.2-201ENST00000441819 155 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 AC109327.2-201ENST00000448339 378 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 RNU7-113P-201ENST00000459273 62 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 AC025521.1-201ENST00000621624 286 ntBASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
LIMS2Q7Z4I7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-60P-201ENST00000364792 103 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 SNORA1.2-201ENST00000365189 134 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-675P-201ENST00000384236 104 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 Y_RNA.470-201ENST00000384307 117 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 BX510359.4-201ENST00000423750 193 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 AC022254.1-201ENST00000567857 235 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 AC091304.10-201ENST00000641554 121 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 ICE2P2-201ENST00000483823 2787 ntBASIC2.1□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-228P-201ENST00000362700 106 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-1201P-201ENST00000384227 107 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-616P-201ENST00000384353 107 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-950P-201ENST00000384651 107 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 RNU6-1031P-201ENST00000384773 107 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 MIR3152-201ENST00000579801 74 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 MIR548AE2-201ENST00000583456 67 ntBASIC2.09□□□□□ -2.07
LIMS2Q7Z4I7 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
LIMS2Q7Z4I7 SNORA22.1-201ENST00000362701 134 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.95-201ENST00000363079 95 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 Y_RNA.370-201ENST00000365589 108 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 SNORA18-201ENST00000384416 132 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 RNU1-148P-201ENST00000384472 162 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 SNORA7.5-201ENST00000410672 110 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 BTF3P4-201ENST00000418852 495 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 RPL23AP63-201ENST00000498752 471 ntBASIC2.08□□□□□ -2.08
LIMS2Q7Z4I7 RNU7-12P-201ENST00000516030 62 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms