Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC104850.1-201ENST00000435940 476 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 AC244090.1-201ENST00000441884 93 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 AC127455.1-201ENST00000565496 145 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 MIR2681-201ENST00000581814 105 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.05□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 SNORD115-23-201ENST00000364461 82 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 SNORD74.6-201ENST00000364796 70 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNY3P9-201ENST00000384727 106 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 MIR519E-201ENST00000385075 84 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNU7-79P-201ENST00000516082 62 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AL357078.3-201ENST00000607528 618 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AC087683.2-201ENST00000611384 326 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 MIR6502-201ENST00000617296 76 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AL354950.2-201ENST00000617939 290 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 SNORD115-25-201ENST00000362619 82 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 SNORD50.1-201ENST00000362987 71 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1209P-201ENST00000363655 107 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 MIR147A-201ENST00000385079 72 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 MIR548H3-201ENST00000408771 118 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 RNU6-118P-201ENST00000516552 102 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 AC073534.2-201ENST00000620377 381 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 MIR6818-201ENST00000621576 65 ntBASIC-1.06□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-653P-201ENST00000363074 106 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-413P-201ENST00000384115 107 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 MIR548I2-201ENST00000408348 149 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 AC022028.1-201ENST00000412054 408 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 AC005357.1-201ENST00000588399 301 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 MIR8485-201ENST00000401372 91 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 CEP57L1P1-201ENST00000430943 1201 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 MIR4424-201ENST00000585257 86 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 PART1_1.1-201ENST00000611761 217 ntBASIC-1.07□□□□□ -2.58
CSPG4Q6UVK1 RNU6-181P-201ENST00000363225 107 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 RNU6-312P-201ENST00000364629 107 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 RNU6-533P-201ENST00000384144 107 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 SNORA20-201ENST00000384662 132 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 MIR1278-201ENST00000408753 81 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 SERF1AP1-201ENST00000514575 187 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 RNU6-445P-201ENST00000516949 107 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 AC006386.1-201ENST00000619436 415 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 AC092794.2-201ENST00000620933 563 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 AL669831.3-213ENST00000636676 183 ntBASIC-1.08□□□□□ -2.58
CSPG4Q6UVK1 RNU6-501P-201ENST00000364072 100 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.378-201ENST00000365652 113 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 Y_RNA.529-201ENST00000384586 119 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU6-159P-201ENST00000391080 106 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 AL603914.1-201ENST00000401964 204 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 MTCYBP8-201ENST00000422855 651 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 MTATP6P13-201ENST00000438531 667 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 AL353813.1-201ENST00000440700 253 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU7-45P-201ENST00000459460 63 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU6-751P-201ENST00000516382 101 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU7-116P-201ENST00000516940 62 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU7-35P-201ENST00000517174 62 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 MIR548AG2-201ENST00000581228 64 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.09□□□□□ -2.58
CSPG4Q6UVK1 RNU6-228P-201ENST00000362700 106 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 RNU6-973P-201ENST00000364690 107 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 RNU6-214P-201ENST00000384130 107 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MIR652-201ENST00000385278 98 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AL365203.2-201ENST00000423444 196 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 ACA59.1-201ENST00000515966 143 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC100767.1-201ENST00000528178 123 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MIR3682-201ENST00000581338 84 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AC027449.1-201ENST00000608890 407 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 AL008718.3-201ENST00000610217 321 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 MIR664B-201ENST00000626756 61 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 SNORD114-10-201ENST00000363409 72 ntBASIC-1.1□□□□□ -2.59
CSPG4Q6UVK1 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms