Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 SNORA25.18-201ENST00000607153 114 ntBASIC0.12□□□□□ -2.39
KCNIP4Q6PIL6 MIR6717-201ENST00000622747 73 ntBASIC0.12□□□□□ -2.39
KCNIP4Q6PIL6 MIR4315-1-201ENST00000636800 73 ntBASIC0.12□□□□□ -2.39
KCNIP4Q6PIL6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.12□□□□□ -2.39
KCNIP4Q6PIL6 MIR4315-2-201ENST00000640925 73 ntBASIC0.12□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.214-201ENST00000364201 112 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNU6-740P-201ENST00000364734 105 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.634-201ENST00000364811 113 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNA5SP117-201ENST00000365294 118 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.354-201ENST00000365448 111 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNU6-1189P-201ENST00000383958 107 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.430-201ENST00000384081 110 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNY3P5-201ENST00000384127 102 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNU6-514P-201ENST00000384208 107 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 MIR626-201ENST00000385032 94 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 RNU6-101P-201ENST00000410323 104 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 ELOCP20-201ENST00000422460 345 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 SNORA62.5-201ENST00000516634 120 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 AC069113.3-201ENST00000521019 150 ntBASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
KCNIP4Q6PIL6 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 RNU6-770P-201ENST00000363929 105 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 RNU4-10P-201ENST00000364383 140 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.269-201ENST00000364685 89 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 SNORA8.3-201ENST00000384679 139 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 MIR215-201ENST00000384858 110 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 MIR598-201ENST00000384868 97 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 snoU13.18-201ENST00000459483 104 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 AC133485.4-201ENST00000561835 220 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 SNORA4-201ENST00000584302 138 ntBASIC0.1□□□□□ -2.39
KCNIP4Q6PIL6 Y_RNA.91-201ENST00000363042 107 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-653P-201ENST00000363074 106 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 AL138752.1-201ENST00000452964 351 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-1299P-201ENST00000516316 100 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 AC006006.1-201ENST00000603082 144 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 AP001282.2-201ENST00000616149 309 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.09□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.24-201ENST00000362508 103 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.389-201ENST00000383924 113 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-211P-201ENST00000384047 107 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-815P-201ENST00000384080 113 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.572-201ENST00000384757 98 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 RNA5SP261-201ENST00000410536 106 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 RPL21P38-201ENST00000418090 167 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 SNORA40.15-201ENST00000516884 107 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 AC112693.2-201ENST00000556538 232 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 AC022709.1-201ENST00000615967 87 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 AL662814.1-201ENST00000617364 121 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 AC010487.4-201ENST00000637027 61 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 MIR924-201ENST00000638017 53 ntBASIC0.08□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.509-201ENST00000384506 99 ntBASIC0.07□□□□□ -2.4
KCNIP4Q6PIL6 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
KCNIP4Q6PIL6 SERF1AP1-201ENST00000514575 187 ntBASIC0.07□□□□□ -2.4
KCNIP4Q6PIL6 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
KCNIP4Q6PIL6 MIR376A2-201ENST00000636782 80 ntBASIC0.07□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.19-201ENST00000362462 99 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-1099P-201ENST00000363533 107 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.275-201ENST00000364726 110 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.419-201ENST00000384041 102 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.432-201ENST00000384087 111 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-474P-201ENST00000384243 107 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 AC096949.1-201ENST00000412047 152 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-1143P-201ENST00000516125 104 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.804-201ENST00000615262 101 ntBASIC0.06□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.7-201ENST00000362352 102 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.16-201ENST00000362421 102 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.542-201ENST00000384641 111 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 SNORD93-201ENST00000408813 74 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 RNA5SP193-201ENST00000410353 107 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 RNU2-70P-201ENST00000410718 179 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 RNU4-83P-201ENST00000410863 133 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 AL512326.2-201ENST00000426359 151 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 AC073261.1-201ENST00000429409 121 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 SNRPGP8-201ENST00000454064 226 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 MIR5197-201ENST00000583721 112 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 MIR6841-201ENST00000637129 72 ntBASIC0.05□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.26-201ENST00000362539 101 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.84-201ENST00000363011 104 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 RNU5E-4P-201ENST00000364931 120 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-806P-201ENST00000365147 105 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 SNORA1-201ENST00000384107 130 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.455-201ENST00000384230 98 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 SNORD2.1-201ENST00000458762 69 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 RNU6-988P-201ENST00000519081 107 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 AC113195.1-201ENST00000579952 141 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 MIR6082-201ENST00000613604 109 ntBASIC0.04□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.152-201ENST00000363578 100 ntBASIC0.03□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.158-201ENST00000363651 101 ntBASIC0.03□□□□□ -2.4
KCNIP4Q6PIL6 RNY1-201ENST00000364228 113 ntBASIC0.03□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.304-201ENST00000365011 112 ntBASIC0.03□□□□□ -2.4
KCNIP4Q6PIL6 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms