Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR4514-201ENST00000581410 57 ntBASIC0.34□□□□□ -2.36
ATL3Q6DD88 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.33□□□□□ -2.36
ATL3Q6DD88 Y_RNA.84-201ENST00000363011 104 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 Y_RNA.138-201ENST00000363462 102 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 Y_RNA.229-201ENST00000364347 113 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 RNU6-484P-201ENST00000384016 107 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 RNU6-211P-201ENST00000384047 107 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 MIR588-201ENST00000384900 83 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 MIR125B2-201ENST00000385128 89 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 MIR938-201ENST00000401216 83 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 RNU2-55P-201ENST00000411146 174 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 SNRPGP8-201ENST00000454064 226 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 RNU6-504P-201ENST00000516568 104 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 RNU7-53P-201ENST00000516705 60 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 AC090897.1-201ENST00000580909 226 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 AC008608.1-201ENST00000603910 127 ntBASIC0.33□□□□□ -2.36
ATL3Q6DD88 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.32□□□□□ -2.36
ATL3Q6DD88 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 Y_RNA.258-201ENST00000364613 105 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 Y_RNA.527-201ENST00000384573 102 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.32□□□□□ -2.36
ATL3Q6DD88 SERF1AP1-201ENST00000514575 187 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 RNU6-1143P-201ENST00000516125 104 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 RNU6-1137P-201ENST00000517073 99 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.32□□□□□ -2.36
ATL3Q6DD88 AL360085.1-201ENST00000604713 532 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 AL162730.1-201ENST00000605734 292 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 AC010332.2-201ENST00000613083 1904 ntBASIC0.32□□□□□ -2.36
ATL3Q6DD88 MIR30D-201ENST00000362283 70 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.153-201ENST00000363615 91 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.210-201ENST00000364161 110 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.634-201ENST00000364811 113 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.440-201ENST00000384120 114 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.460-201ENST00000384255 102 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 SNORA8.3-201ENST00000384679 139 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 SNORD77.3-201ENST00000391113 65 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNU6-1165P-201ENST00000410119 107 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNU6-1190P-201ENST00000410811 104 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNU7-185P-201ENST00000459215 60 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 AC002350.1-201ENST00000490759 375 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNU6-998P-201ENST00000515894 101 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 RNU6-1270P-201ENST00000517128 108 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 AC020661.2-201ENST00000560114 134 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 MIR4680-201ENST00000580906 66 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 SNORD92-201ENST00000585078 85 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 AC037487.3-201ENST00000606668 112 ntBASIC0.31□□□□□ -2.36
ATL3Q6DD88 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ATL3Q6DD88 Y_RNA.216-201ENST00000364205 93 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 Y_RNA.410-201ENST00000383992 113 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 RNU6-514P-201ENST00000384208 107 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 Y_RNA.535-201ENST00000384612 99 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 SNORD12C-201ENST00000386307 89 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 SNORA26.6-201ENST00000391256 115 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 RNU6-1203P-201ENST00000410703 110 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.3□□□□□ -2.36
ATL3Q6DD88 RNU7-96P-201ENST00000459535 64 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 TRBVB-201ENST00000477100 408 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 RNU6-1338P-201ENST00000516328 91 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 AC006006.1-201ENST00000603082 144 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 AC097639.2-201ENST00000603159 172 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.3□□□□□ -2.36
ATL3Q6DD88 Y_RNA.91-201ENST00000363042 107 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNU6-1309P-201ENST00000363305 108 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 SNORA1.1-201ENST00000364671 133 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 Y_RNA.275-201ENST00000364726 110 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNU6-1289P-201ENST00000384431 106 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 MIR548P-201ENST00000408336 84 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 MTND5P22-201ENST00000458380 195 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNU7-102P-201ENST00000458948 62 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNU2-11P-201ENST00000459191 187 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNA5SP153-201ENST00000516498 76 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 RNU7-156P-201ENST00000517214 74 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 MIR3171-201ENST00000584270 74 ntBASIC0.29□□□□□ -2.36
ATL3Q6DD88 Y_RNA.61-201ENST00000362835 102 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNA5SP517-201ENST00000364724 117 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 Y_RNA.433-201ENST00000384089 102 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNY3P5-201ENST00000384127 102 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 MT-TT-201ENST00000387460 66 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1319P-201ENST00000390855 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-747P-201ENST00000390928 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-241P-201ENST00000391148 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-447P-201ENST00000410293 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1118P-201ENST00000410382 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1076P-201ENST00000410397 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-355P-201ENST00000410427 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-791P-201ENST00000410467 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-705P-201ENST00000410601 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1100P-201ENST00000410691 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-860P-201ENST00000410860 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1217P-201ENST00000411276 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-785P-201ENST00000411324 104 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 MTND4LP11-201ENST00000422184 280 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 RNU6-1299P-201ENST00000516316 100 ntBASIC0.28□□□□□ -2.36
ATL3Q6DD88 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms