Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 AL117351.1-201ENST00000438864 766 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 AC099654.12-201ENST00000639868 649 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 SNORA63.6-201ENST00000364921 119 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 MTND1P34-201ENST00000438556 671 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.35□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 SNORA25.10-201ENST00000515926 124 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU6-280P-201ENST00000364145 104 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.358-201ENST00000365491 99 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 SNORD70.1-201ENST00000391007 85 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU6-243P-201ENST00000391140 107 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 SNORA26.6-201ENST00000391256 115 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 MIR320C1-201ENST00000408566 88 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU6-387P-201ENST00000411331 105 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU6-415P-201ENST00000516252 97 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU1-54P-201ENST00000517181 120 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 AC245884.10-201ENST00000597355 337 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 AC091144.1-201ENST00000519573 138 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 SNORD65C-201ENST00000390962 71 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 U7.5-201ENST00000517224 61 ntBASIC-1.36□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1005P-201ENST00000384519 107 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 MIR216B-201ENST00000390186 82 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 MTATP6P19-201ENST00000413797 659 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-913P-201ENST00000390913 95 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-141P-201ENST00000410499 105 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU7-80P-201ENST00000459562 61 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-693P-201ENST00000516134 107 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 MTND2P20-201ENST00000440805 661 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 SNRPGP8-201ENST00000454064 226 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.658-201ENST00000515990 97 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 TUSC7.1-201ENST00000610969 165 ntBASIC-1.37□□□□□ -2.63
VPS13DQ5THJ4 RNU6-933P-201ENST00000384424 107 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 MIR521-1-201ENST00000384902 87 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 MIR519A1-201ENST00000385257 85 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 RNU2-66P-201ENST00000410650 161 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 MIR6888-201ENST00000621977 67 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AL354751.2-201ENST00000415471 210 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 RNU7-149P-201ENST00000516739 59 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 RNU6-85P-201ENST00000605989 107 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC092574.1-201ENST00000609771 420 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AP002782.1-201ENST00000623107 614 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 SNORD56.4-201ENST00000363883 71 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 RNY1P12-201ENST00000364251 105 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC137499.1-201ENST00000427602 88 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 Z83846.1-201ENST00000446798 265 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC107934.1-201ENST00000522215 217 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC008507.4-201ENST00000585464 127 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC124303.1-201ENST00000605703 360 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 U6.115-201ENST00000636045 103 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 AC108729.2-201ENST00000476543 840 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 MIR548O2-201ENST00000616090 70 ntBASIC-1.38□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.566-201ENST00000384735 101 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 AP000542.1-201ENST00000448473 371 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 AC026741.1-201ENST00000605892 482 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 MIR5683-201ENST00000636514 76 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 RNU6-61P-201ENST00000365528 109 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 SNORD114-7-201ENST00000362520 77 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 RNU4-80P-201ENST00000363200 141 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 MIR5693-201ENST00000577722 73 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.39□□□□□ -2.63
VPS13DQ5THJ4 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 AL031003.1-201ENST00000404229 172 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 PMCHL1-202ENST00000423102 261 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 MTND2P6-201ENST00000455337 1030 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 snoU109.3-201ENST00000459477 145 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 AC097484.2-201ENST00000509147 251 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 RNU6-850P-201ENST00000516934 103 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 AC005771.1-201ENST00000585581 349 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 MIR3674-201ENST00000636576 68 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 SNORD101-201ENST00000384027 73 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 SNORA53-201ENST00000391141 249 ntBASIC-1.4□□□□□ -2.63
VPS13DQ5THJ4 TIMM9P2-201ENST00000419324 266 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms