Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC178Q5BJE1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 RNA5SP363-201ENST00000365072 115 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 Y_RNA.366-201ENST00000365540 102 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 RNU7-45P-201ENST00000459460 63 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 RNU7-96P-201ENST00000459535 64 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 RNU6-947P-201ENST00000516264 106 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 AL359881.1-201ENST00000602916 267 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 AC243994.1-201ENST00000618627 109 ntBASIC1.85□□□□□ -2.11
CCDC178Q5BJE1 SNORA70.7-201ENST00000384159 133 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RNY1P6-201ENST00000384193 109 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RNU6-997P-201ENST00000384725 107 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RNU6-1067P-201ENST00000384752 107 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 MIR1263-201ENST00000408324 86 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 AL035398.1-201ENST00000430869 322 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RPS29P29-201ENST00000456396 171 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RNU6-998P-201ENST00000515894 101 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 RNU6-781P-201ENST00000516377 101 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 AC015688.6-201ENST00000577737 104 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 MIR4764-201ENST00000580680 88 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 BX248123.2-201ENST00000606318 124 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 MIR4791-201ENST00000607666 84 ntBASIC1.84□□□□□ -2.11
CCDC178Q5BJE1 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
CCDC178Q5BJE1 SNORA51.10-201ENST00000384418 136 ntBASIC1.83□□□□□ -2.12
CCDC178Q5BJE1 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
CCDC178Q5BJE1 RN7SKP19-201ENST00000516016 252 ntBASIC1.83□□□□□ -2.12
CCDC178Q5BJE1 AL442644.1-201ENST00000454390 3105 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 AL603825.1-201ENST00000438481 80 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 RN7SKP179-201ENST00000516126 217 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 RNU6-970P-201ENST00000516312 107 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 SNORD111.1-201ENST00000516421 86 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 RNU6-659P-201ENST00000516454 104 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 SNORA44.1-201ENST00000517031 108 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 AL137067.1-201ENST00000615933 120 ntBASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC178Q5BJE1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 Y_RNA.280-201ENST00000364765 112 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 MIR653-201ENST00000385279 96 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 SNORA67.6-201ENST00000391093 99 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 RNU7-43P-201ENST00000516554 64 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 RNU7-53P-201ENST00000516705 60 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 IGKV1-22-201ENST00000524313 326 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 MIR3937-201ENST00000580135 106 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 MIR4285-201ENST00000581001 85 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 AC021443.1-201ENST00000604478 211 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 AC008133.2-201ENST00000624540 351 ntBASIC1.81□□□□□ -2.12
CCDC178Q5BJE1 RNU6-349P-201ENST00000362402 107 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 RNU6-1290P-201ENST00000362957 109 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 RNU6-60P-201ENST00000364792 103 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 SNORD58C-201ENST00000365223 64 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 SNORD41-201ENST00000386967 70 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 Y_RNA.630-201ENST00000411370 108 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 RNU6-113P-201ENST00000516653 101 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.8□□□□□ -2.12
CCDC178Q5BJE1 AC079140.2-201ENST00000506193 142 ntBASIC1.79□□□□□ -2.12
CCDC178Q5BJE1 RNU7-41P-201ENST00000515917 61 ntBASIC1.79□□□□□ -2.12
CCDC178Q5BJE1 AL161722.3-201ENST00000605789 2983 ntBASIC1.79□□□□□ -2.12
CCDC178Q5BJE1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 RNA5SP205-201ENST00000364653 136 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 Y_RNA.537-201ENST00000384626 109 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 RNU6-913P-201ENST00000390913 95 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 RNU6-1190P-201ENST00000410811 104 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 HMGN1P33-201ENST00000432945 451 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 RNU7-164P-201ENST00000459221 62 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 MTND5P34-201ENST00000568888 325 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 AL513534.2-201ENST00000603836 250 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 AC025166.1-201ENST00000612411 163 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.78□□□□□ -2.12
CCDC178Q5BJE1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 SNORD1A-201ENST00000364968 72 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 RNU6-735P-201ENST00000410612 107 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 Y_RNA.617-201ENST00000410920 90 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 SNORA31.4-201ENST00000516049 129 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 RNY4P20-201ENST00000516678 93 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 AC021613.1-201ENST00000623880 111 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 MIR4251-201ENST00000635819 61 ntBASIC1.77□□□□□ -2.13
CCDC178Q5BJE1 RNU1-42P-201ENST00000364033 160 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 Y_RNA.528-201ENST00000384575 108 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 SNORA17.3-201ENST00000391159 129 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 MIR1304-201ENST00000408243 91 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 RNU2-13P-201ENST00000515909 113 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 SNORD33.1-201ENST00000516213 88 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 MIR4305-201ENST00000583252 102 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 AP000942.3-201ENST00000603702 160 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 MIR3914-2-201ENST00000637339 95 ntBASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CCDC178Q5BJE1 AL391516.1-201ENST00000554380 2449 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 AC008834.1-201ENST00000511612 175 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 RNA5SP458-201ENST00000516188 119 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 Y_RNA.712-201ENST00000517011 92 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
CCDC178Q5BJE1 AL357312.1-201ENST00000603879 298 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms