Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 Y_RNA.435-201ENST00000384095 112 ntBASIC1.13□□□□□ -2.23
CCDC38Q502W7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC38Q502W7 RNU6-998P-201ENST00000515894 101 ntBASIC1.13□□□□□ -2.23
CCDC38Q502W7 MIR3129-201ENST00000581095 76 ntBASIC1.13□□□□□ -2.23
CCDC38Q502W7 AP000753.3-201ENST00000604083 169 ntBASIC1.13□□□□□ -2.23
CCDC38Q502W7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 RNU6-643P-201ENST00000384018 107 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 MT-TG-201ENST00000387429 68 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 RNU6-913P-201ENST00000390913 95 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 RNU6-918P-201ENST00000391219 106 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 PDCD5P2-201ENST00000507570 312 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 RNA5SP102-201ENST00000516865 106 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 MIR5197-201ENST00000583721 112 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 MIR8055-201ENST00000610739 97 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 MIR6504-201ENST00000613520 61 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
CCDC38Q502W7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 Y_RNA.191-201ENST00000363972 113 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 RNU6-978P-201ENST00000364371 103 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 SNORA2B-201ENST00000384583 137 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 MIR1276-201ENST00000408707 83 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 MIR4264-201ENST00000583520 66 ntBASIC1.11□□□□□ -2.23
CCDC38Q502W7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC38Q502W7 RNU6-1020P-201ENST00000363684 107 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 RNU6-125P-201ENST00000384505 107 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 RNA5SP95-201ENST00000410319 137 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 AL138752.1-201ENST00000452964 351 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 RNU2-11P-201ENST00000459191 187 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 AC141273.2-201ENST00000618989 130 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 Z97988.1-201ENST00000637697 135 ntBASIC1.1□□□□□ -2.23
CCDC38Q502W7 RNU6-580P-201ENST00000365159 107 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 MIR548I3-201ENST00000408378 149 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 AC090844.1-201ENST00000422019 156 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 AC067940.1-201ENST00000458411 300 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 RNU7-80P-201ENST00000459562 61 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC38Q502W7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC38Q502W7 AC130289.1-201ENST00000577321 73 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 U6.106-201ENST00000636360 105 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 MIR376A2-201ENST00000636782 80 ntBASIC1.09□□□□□ -2.23
CCDC38Q502W7 Y_RNA.351-201ENST00000365436 96 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 Y_RNA.515-201ENST00000384535 112 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 SNORD38B-201ENST00000384690 67 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 MIR518E-201ENST00000385252 88 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 RNU6-994P-201ENST00000410507 111 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 POLR2J4-204ENST00000418424 324 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 RNA5SP255-201ENST00000516370 107 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 AL078603.1-201ENST00000603824 313 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 RNU6-94P-201ENST00000607728 107 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 SNORD38B-202ENST00000625943 69 ntBASIC1.08□□□□□ -2.24
CCDC38Q502W7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.07□□□□□ -2.24
CCDC38Q502W7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC38Q502W7 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 RNU6-379P-201ENST00000363813 104 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 SNORA1.1-201ENST00000364671 133 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 Y_RNA.454-201ENST00000384224 113 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 Y_RNA.508-201ENST00000384502 114 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 U7.7-201ENST00000459276 60 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.07□□□□□ -2.24
CCDC38Q502W7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
CCDC38Q502W7 MIR342-201ENST00000362212 99 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 Y_RNA.116-201ENST00000363292 103 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 RNU6-47P-201ENST00000383866 107 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 Y_RNA.476-201ENST00000384347 108 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 Y_RNA.552-201ENST00000384665 112 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 RNU6-205P-201ENST00000390858 107 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 RNA5SP127-201ENST00000411051 133 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 AC244023.1-201ENST00000426884 112 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 MIR4431-201ENST00000579990 94 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC38Q502W7 AC242498.1-201ENST00000604134 111 ntBASIC1.06□□□□□ -2.24
CCDC38Q502W7 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 MIR624-201ENST00000385217 97 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 AC006461.1-201ENST00000412637 326 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 RPS3AP1-201ENST00000413190 320 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC38Q502W7 AC087343.1-201ENST00000477341 475 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 AL136317.1-201ENST00000612653 226 ntBASIC1.05□□□□□ -2.24
CCDC38Q502W7 SNORA25.7-201ENST00000364375 127 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 RNU6-312P-201ENST00000364629 107 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 Y_RNA.274-201ENST00000364714 101 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 RNA5SP261-201ENST00000410536 106 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 HMGN1P33-201ENST00000432945 451 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 SEPT7P4-201ENST00000437076 306 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC38Q502W7 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 MIR6734-201ENST00000621166 68 ntBASIC1.04□□□□□ -2.24
CCDC38Q502W7 Y_RNA.233-201ENST00000364407 101 ntBASIC1.03□□□□□ -2.24
CCDC38Q502W7 RNU6-1187P-201ENST00000364771 110 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms