Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SNORD67-201ENST00000390833 111 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 SNORD77.2-201ENST00000391045 68 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 RN7SL636P-201ENST00000497504 294 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 RNU6-237P-201ENST00000515985 71 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 RNU7-156P-201ENST00000517214 74 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 MIR8054-201ENST00000620877 86 ntBASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.2□□□□□ -1.9
CTC1Q2NKJ3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-461P-201ENST00000364195 107 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 MIR592-201ENST00000384959 97 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 SNORD28B-201ENST00000390993 75 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-447P-201ENST00000410293 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-1118P-201ENST00000410382 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-1076P-201ENST00000410397 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-355P-201ENST00000410427 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-791P-201ENST00000410467 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-705P-201ENST00000410601 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-1100P-201ENST00000410691 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-860P-201ENST00000410860 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU4-83P-201ENST00000410863 133 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-1217P-201ENST00000411276 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU6-785P-201ENST00000411324 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU1-41P-201ENST00000516161 162 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 RNU1-48P-201ENST00000516400 162 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 AC005520.4-201ENST00000604337 90 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 AL512598.1-201ENST00000610158 273 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 U6.90-201ENST00000614007 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 U6.70-201ENST00000620287 104 ntBASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.19□□□□□ -1.9
CTC1Q2NKJ3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 Y_RNA.99-201ENST00000363138 105 ntBASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 RNU6-811P-201ENST00000384069 107 ntBASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 U8.16-201ENST00000391279 133 ntBASIC3.18□□□□□ -1.9
CTC1Q2NKJ3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 SNORA18.5-201ENST00000516616 101 ntBASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 MIR8065-201ENST00000620577 100 ntBASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 AL161722.3-201ENST00000605789 2983 ntBASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTC1Q2NKJ3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 SNORA25B-201ENST00000365507 128 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 MIR520H-201ENST00000385126 88 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 Z96811.1-201ENST00000445880 108 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 AC093850.1-201ENST00000454121 251 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 MIR548AR-201ENST00000582191 57 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 SNORA28-201ENST00000606769 126 ntBASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.16□□□□□ -1.9
CTC1Q2NKJ3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 RNU6-208P-201ENST00000362431 107 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 RNU6-1237P-201ENST00000384777 107 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 RNA5SP344-201ENST00000411081 104 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 AC023790.1-201ENST00000482174 347 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 SNORA31.10-201ENST00000516482 106 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 RNU6-303P-201ENST00000517091 106 ntBASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTC1Q2NKJ3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 HSBP1P2-201ENST00000299671 229 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 AC073325.2-201ENST00000339545 159 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 RNU6-833P-201ENST00000363486 107 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 RNU6-614P-201ENST00000384369 107 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 RNU6-160P-201ENST00000384591 107 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 RNA5SP508-201ENST00000411327 119 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 AC074348.1-201ENST00000426503 132 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 RNU7-12P-201ENST00000516030 62 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 U6.59-201ENST00000615686 107 ntBASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC3.14□□□□□ -1.91
CTC1Q2NKJ3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 SNORA8.1-201ENST00000384250 140 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 SNORA26.7-201ENST00000391288 122 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 AC087499.2-201ENST00000432861 149 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 Y_RNA.648-201ENST00000459455 110 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 AC018868.1-201ENST00000491307 315 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 RPS29P11-201ENST00000496507 171 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 AC079600.2-201ENST00000550076 130 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 AC067747.1-201ENST00000608026 250 ntBASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTC1Q2NKJ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 RNU6-443P-201ENST00000384780 107 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 MIR627-201ENST00000384979 97 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 MIR136-201ENST00000385207 82 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AC015818.7-201ENST00000428754 109 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 AC005908.1-201ENST00000468701 347 ntBASIC3.12□□□□□ -1.91
CTC1Q2NKJ3 RNA5SP168-201ENST00000516642 112 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms