Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
LTBQ06643 RPS26P48-201ENST00000491713 339 ntBASIC1.53□□□□□ -2.16
LTBQ06643 MIR502-201ENST00000606349 86 ntBASIC1.53□□□□□ -2.16
LTBQ06643 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
LTBQ06643 AL391516.1-201ENST00000554380 2449 ntBASIC1.52□□□□□ -2.17
LTBQ06643 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
LTBQ06643 Y_RNA.366-201ENST00000365540 102 ntBASIC1.52□□□□□ -2.17
LTBQ06643 MIRLET7F2-201ENST00000385277 83 ntBASIC1.52□□□□□ -2.17
LTBQ06643 U8.17-201ENST00000391292 132 ntBASIC1.52□□□□□ -2.17
LTBQ06643 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.52□□□□□ -2.17
LTBQ06643 RNA5SP57-201ENST00000459463 123 ntBASIC1.52□□□□□ -2.17
LTBQ06643 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
LTBQ06643 SNORD33.1-201ENST00000516213 88 ntBASIC1.52□□□□□ -2.17
LTBQ06643 SNORA18.7-201ENST00000516910 131 ntBASIC1.52□□□□□ -2.17
LTBQ06643 HSPE1P19-201ENST00000603327 295 ntBASIC1.52□□□□□ -2.17
LTBQ06643 AC103810.8-201ENST00000607347 118 ntBASIC1.52□□□□□ -2.17
LTBQ06643 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
LTBQ06643 RNU6-349P-201ENST00000362402 107 ntBASIC1.51□□□□□ -2.17
LTBQ06643 Y_RNA.241-201ENST00000364470 117 ntBASIC1.51□□□□□ -2.17
LTBQ06643 RNU6-1325P-201ENST00000364905 105 ntBASIC1.51□□□□□ -2.17
LTBQ06643 RNA5SP363-201ENST00000365072 115 ntBASIC1.51□□□□□ -2.17
LTBQ06643 Y_RNA.374-201ENST00000365606 101 ntBASIC1.51□□□□□ -2.17
LTBQ06643 MIR452-201ENST00000385020 85 ntBASIC1.51□□□□□ -2.17
LTBQ06643 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
LTBQ06643 RNU6-1064P-201ENST00000410626 104 ntBASIC1.51□□□□□ -2.17
LTBQ06643 RNU6-240P-201ENST00000516098 97 ntBASIC1.51□□□□□ -2.17
LTBQ06643 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
LTBQ06643 MIR342-201ENST00000362212 99 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-834P-201ENST00000362367 110 ntBASIC1.5□□□□□ -2.17
LTBQ06643 Y_RNA.36-201ENST00000362602 112 ntBASIC1.5□□□□□ -2.17
LTBQ06643 Y_RNA.81-201ENST00000362997 102 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-1056P-201ENST00000383996 107 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-44P-201ENST00000384045 107 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-1144P-201ENST00000384247 104 ntBASIC1.5□□□□□ -2.17
LTBQ06643 SNORA27-201ENST00000384323 126 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR136-201ENST00000385207 82 ntBASIC1.5□□□□□ -2.17
LTBQ06643 SNORD28B-201ENST00000390993 75 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR1263-201ENST00000408324 86 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR1267-201ENST00000408723 78 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNU6-113P-201ENST00000516653 101 ntBASIC1.5□□□□□ -2.17
LTBQ06643 RNA5SP102-201ENST00000516865 106 ntBASIC1.5□□□□□ -2.17
LTBQ06643 SUMO2P16-201ENST00000519475 264 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR3198-2-201ENST00000577868 80 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR548AR-201ENST00000582191 57 ntBASIC1.5□□□□□ -2.17
LTBQ06643 AC025166.1-201ENST00000612411 163 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR6129-201ENST00000616087 109 ntBASIC1.5□□□□□ -2.17
LTBQ06643 MIR6515-201ENST00000619843 57 ntBASIC1.5□□□□□ -2.17
LTBQ06643 AC091932.4-201ENST00000623386 200 ntBASIC1.5□□□□□ -2.17
LTBQ06643 AL596211.1-201ENST00000569873 2277 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-34-201ENST00000362441 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-12-201ENST00000362583 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-29-201ENST00000362834 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-9-201ENST00000362912 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-21-201ENST00000362963 81 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-14-201ENST00000363090 81 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-13-201ENST00000363358 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-41-201ENST00000363608 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-11-201ENST00000363616 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-5-201ENST00000363633 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-39-201ENST00000363694 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-4-201ENST00000363810 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-16-201ENST00000363887 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-6-201ENST00000363942 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-42-201ENST00000364273 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-15-201ENST00000364809 81 ntBASIC1.49□□□□□ -2.17
LTBQ06643 RNU1-133P-201ENST00000364867 167 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-1-201ENST00000364961 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-26-201ENST00000365067 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-10-201ENST00000365073 81 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-43-201ENST00000365503 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-36-201ENST00000365629 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 RNU6-476P-201ENST00000384726 107 ntBASIC1.49□□□□□ -2.17
LTBQ06643 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
LTBQ06643 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
LTBQ06643 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
LTBQ06643 MTND5P34-201ENST00000568888 325 ntBASIC1.49□□□□□ -2.17
LTBQ06643 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.49□□□□□ -2.17
LTBQ06643 SNORD115-40-201ENST00000606510 82 ntBASIC1.49□□□□□ -2.17
LTBQ06643 AL137067.1-201ENST00000615933 120 ntBASIC1.49□□□□□ -2.17
LTBQ06643 AC106754.2-201ENST00000623006 233 ntBASIC1.49□□□□□ -2.17
LTBQ06643 U6.95-201ENST00000636931 70 ntBASIC1.49□□□□□ -2.17
LTBQ06643 MTND5P18-201ENST00000445624 1801 ntBASIC1.49□□□□□ -2.17
LTBQ06643 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
LTBQ06643 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
LTBQ06643 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
LTBQ06643 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.48□□□□□ -2.17
LTBQ06643 AL035461.1-201ENST00000421490 332 ntBASIC1.48□□□□□ -2.17
LTBQ06643 RNU7-80P-201ENST00000459562 61 ntBASIC1.48□□□□□ -2.17
LTBQ06643 RNU6-917P-201ENST00000516294 104 ntBASIC1.48□□□□□ -2.17
LTBQ06643 RNU7-70P-201ENST00000516941 66 ntBASIC1.48□□□□□ -2.17
LTBQ06643 SNORA44.1-201ENST00000517031 108 ntBASIC1.48□□□□□ -2.17
LTBQ06643 FAM106DP-201ENST00000586416 501 ntBASIC1.48□□□□□ -2.17
LTBQ06643 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LTBQ06643 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
LTBQ06643 RNU6-690P-201ENST00000365242 106 ntBASIC1.47□□□□□ -2.17
LTBQ06643 SNORD114-22-201ENST00000365423 72 ntBASIC1.47□□□□□ -2.17
LTBQ06643 Y_RNA.370-201ENST00000365589 108 ntBASIC1.47□□□□□ -2.17
LTBQ06643 MIR570-201ENST00000384917 97 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms