Protein–RNA interactions for Protein: Q05048

CSTF1, Cleavage stimulation factor subunit 1, humanhuman

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1Q05048 SNORD36C-201ENST00000516733 66 ntBASIC0.66□□□□□ -2.3
CSTF1Q05048 RNU6-1270P-201ENST00000517128 108 ntBASIC0.66□□□□□ -2.3
CSTF1Q05048 AC006006.1-201ENST00000603082 144 ntBASIC0.66□□□□□ -2.3
CSTF1Q05048 uc_338.6-201ENST00000613544 171 ntBASIC0.66□□□□□ -2.3
CSTF1Q05048 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.66□□□□□ -2.3
CSTF1Q05048 MIR5087-201ENST00000635826 76 ntBASIC0.66□□□□□ -2.3
CSTF1Q05048 Y_RNA.20-201ENST00000362479 113 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 SNORD45.3-201ENST00000363836 72 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 RNU6-923P-201ENST00000364753 107 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 Y_RNA.288-201ENST00000364854 92 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 Y_RNA.308-201ENST00000365043 101 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 Y_RNA.350-201ENST00000365409 98 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 SNORA1-201ENST00000384107 130 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 AL606845.1-201ENST00000404881 255 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 RNU6-1190P-201ENST00000410811 104 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 AF228730.3-201ENST00000436691 102 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 snoU13.21-201ENST00000459368 105 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 RNU6-1007P-201ENST00000516586 107 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 MIR2681-201ENST00000581814 105 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 MIR3149-201ENST00000584629 83 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 MIR4791-201ENST00000607666 84 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 AC062037.2-201ENST00000610137 73 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 MTND1P7-201ENST00000632801 297 ntBASIC0.65□□□□□ -2.31
CSTF1Q05048 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CSTF1Q05048 Y_RNA.634-201ENST00000364811 113 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 RNU6-47P-201ENST00000383866 107 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 SNORD38C-201ENST00000384381 69 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 SNORA2B-201ENST00000384583 137 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 RNU6-913P-201ENST00000390913 95 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 RNA5SP496-201ENST00000391240 109 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.64□□□□□ -2.31
CSTF1Q05048 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.64□□□□□ -2.31
CSTF1Q05048 RNU6-830P-201ENST00000516353 107 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 SNORA18.4-201ENST00000516440 124 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 RNA5SP395-201ENST00000516567 118 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 AC022559.1-201ENST00000520905 205 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 AC087685.1-201ENST00000587507 141 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 AL162730.1-201ENST00000605734 292 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 RNU2-4P-201ENST00000606190 192 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 MIR4251-201ENST00000635819 61 ntBASIC0.64□□□□□ -2.31
CSTF1Q05048 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
CSTF1Q05048 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CSTF1Q05048 Y_RNA.144-201ENST00000363521 113 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 RNU6-1336P-201ENST00000383886 109 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 Y_RNA.452-201ENST00000384202 108 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 RNU6-196P-201ENST00000384315 107 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 RNU6-463P-201ENST00000384340 107 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 RNU6-125P-201ENST00000384505 107 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 Y_RNA.626-201ENST00000411288 95 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
CSTF1Q05048 AC015818.7-201ENST00000428754 109 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 AC087499.7-201ENST00000441958 109 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 Y_RNA.679-201ENST00000516416 91 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 AC036111.3-201ENST00000526389 112 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 U4.1-201ENST00000620349 87 ntBASIC0.63□□□□□ -2.31
CSTF1Q05048 Y_RNA.37-201ENST00000362606 108 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 RNY1P11-201ENST00000363759 113 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 RNU4-17P-201ENST00000365598 141 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 MIR616-201ENST00000385293 97 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 SNORD77.3-201ENST00000391113 65 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 AL138752.1-201ENST00000452964 351 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 RNU6-693P-201ENST00000516134 107 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 RNU6-1023P-201ENST00000516137 106 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 AC097639.2-201ENST00000603159 172 ntBASIC0.62□□□□□ -2.31
CSTF1Q05048 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
CSTF1Q05048 RNU6-369P-201ENST00000362515 102 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 RNU6-888P-201ENST00000363010 101 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 RNA5SP499-201ENST00000363982 119 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 Y_RNA.274-201ENST00000364714 101 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 RNU6-702P-201ENST00000364982 107 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 Y_RNA.370-201ENST00000365589 108 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 RNU6-597P-201ENST00000365620 102 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 SNORA24-201ENST00000384096 131 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CSTF1Q05048 AC130289.1-201ENST00000577321 73 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 AC078938.1-201ENST00000620993 318 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 MTND5P32-201ENST00000560711 1802 ntBASIC0.61□□□□□ -2.31
CSTF1Q05048 SNORD115-28-201ENST00000363931 81 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 Y_RNA.262-201ENST00000364641 102 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 RNU6-918P-201ENST00000391219 106 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 MIR548H3-201ENST00000408771 118 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC244023.1-201ENST00000426884 112 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 RNU7-45P-201ENST00000459460 63 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AP003484.1-201ENST00000530974 250 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC011195.1-201ENST00000578177 177 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC025627.3-201ENST00000582078 182 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC242498.1-201ENST00000604134 111 ntBASIC0.6□□□□□ -2.31
CSTF1Q05048 AC243994.1-201ENST00000618627 109 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms