Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 AC091951.2-201ENST00000500762 203 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 MTND5P40-201ENST00000559945 246 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 FGF7P2-201ENST00000332473 296 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 RNY1P2-201ENST00000364820 117 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 MIR147A-201ENST00000385079 72 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 AC093423.1-201ENST00000440817 142 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 MTND2P39-201ENST00000457230 764 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 MTCO2P4-201ENST00000517968 247 ntBASIC-1.82□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 RNU6-20P-201ENST00000384106 107 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 AC097635.1-201ENST00000450678 155 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 RNU6-89P-201ENST00000606519 100 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 AC027449.1-201ENST00000608890 407 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 MIR6841-201ENST00000637129 72 ntBASIC-1.83□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 RNU6-842P-201ENST00000384269 107 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 RNU7-79P-201ENST00000516082 62 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 AC005357.1-201ENST00000588399 301 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 AC079248.2-201ENST00000623779 326 ntBASIC-1.84□□□□□ -2.7
HIST1H1AQ02539 RNU6-626P-201ENST00000363354 107 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 SNORD61-201ENST00000384252 73 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 AF228730.3-201ENST00000436691 102 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 RNU7-141P-201ENST00000459304 62 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 TRAJ51-201ENST00000504127 63 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 RNU6-256P-201ENST00000516747 97 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 MIR2355-201ENST00000517199 87 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 SNORA40.17-201ENST00000517256 115 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 MIR3672-201ENST00000584290 82 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 AC005014.2-201ENST00000607795 599 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.85□□□□□ -2.71
HIST1H1AQ02539 SNORA22.1-201ENST00000362701 134 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 AC145423.2-201ENST00000610631 239 ntBASIC-1.86□□□□□ -2.71
HIST1H1AQ02539 SNORD115-25-201ENST00000362619 82 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 RNU6-973P-201ENST00000364690 107 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 RNU4-28P-201ENST00000364739 141 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 SNORD74.6-201ENST00000364796 70 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 SNORA20-201ENST00000384662 132 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 MIR519E-201ENST00000385075 84 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 AC244090.1-201ENST00000441884 93 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 snoU83B.1-201ENST00000517136 88 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 AP003733.2-201ENST00000529409 171 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 MIR4460-201ENST00000577862 86 ntBASIC-1.87□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 RNU6-888P-201ENST00000363010 101 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 AL160004.2-201ENST00000432935 350 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 AC098614.3-201ENST00000438957 440 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 MTND1P27-201ENST00000451117 902 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 AC083798.1-201ENST00000472671 131 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 MIR5704-201ENST00000584029 77 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 RN7SKP299-201ENST00000606679 301 ntBASIC-1.88□□□□□ -2.71
HIST1H1AQ02539 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 RNU6-429P-201ENST00000384582 108 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 RNY3P10-201ENST00000384764 102 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 AC024067.1-201ENST00000426199 223 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 MIR4662B-201ENST00000579498 81 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 MIR198-201ENST00000637333 62 ntBASIC-1.89□□□□□ -2.71
HIST1H1AQ02539 SNORD116-11-201ENST00000383882 92 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 MIR617-201ENST00000385030 97 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 RNA5SP461-201ENST00000516451 104 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 MIR548AG2-201ENST00000581228 64 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 AL049861.1-201ENST00000603130 150 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 AL021707.8-201ENST00000609428 183 ntBASIC-1.9□□□□□ -2.71
HIST1H1AQ02539 RNA5SP331-201ENST00000364986 107 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 SNORA49-201ENST00000386157 136 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 SNORD115-47-201ENST00000391226 86 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 RNU6-648P-201ENST00000410190 107 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 RNU2-14P-201ENST00000411053 191 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 MTND3P8-201ENST00000412909 339 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 SNX3P1X-201ENST00000414887 175 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 RNU6-311P-201ENST00000516224 102 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 AC100767.1-201ENST00000528178 123 ntBASIC-1.91□□□□□ -2.72
HIST1H1AQ02539 DEFB117-201ENST00000602356 141 ntBASIC-1.91□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms