Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-1190P-201ENST00000410811 104 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 RNA5SP127-201ENST00000411051 133 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 Y_RNA.793-201ENST00000411222 111 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 SEPT7P4-201ENST00000437076 306 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 RNU6-94P-201ENST00000607728 107 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 Z97988.1-201ENST00000637697 135 ntBASIC0.91□□□□□ -2.26
CX3CL1P78423 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.91□□□□□ -2.26
CX3CL1P78423 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CX3CL1P78423 Y_RNA.168-201ENST00000363740 102 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 SNORD113.3-201ENST00000364630 78 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 MIR624-201ENST00000385217 97 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 RNU6-205P-201ENST00000390858 107 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 MIR942-201ENST00000401111 86 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 AP002392.1-201ENST00000537692 208 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 MIR4264-201ENST00000583520 66 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 MIR8055-201ENST00000610739 97 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 AC091932.4-201ENST00000623386 200 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
CX3CL1P78423 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CX3CL1P78423 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
CX3CL1P78423 SNORA25.7-201ENST00000364375 127 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 RNU6-312P-201ENST00000364629 107 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 SNORA1.1-201ENST00000364671 133 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 Y_RNA.327-201ENST00000365201 102 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 Y_RNA.351-201ENST00000365436 96 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 RNU6-597P-201ENST00000365620 102 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 SNORD111-201ENST00000408139 94 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 AL603825.1-201ENST00000438481 80 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 MIR3124-201ENST00000582636 67 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 AP000753.3-201ENST00000604083 169 ntBASIC0.89□□□□□ -2.27
CX3CL1P78423 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.89□□□□□ -2.27
CX3CL1P78423 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
CX3CL1P78423 RNU6-1336P-201ENST00000383886 109 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 SNORA22-201ENST00000383907 134 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 Y_RNA.393-201ENST00000383936 102 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 Y_RNA.521-201ENST00000384560 114 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 SNORA22C-201ENST00000384614 134 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 RNU6-768P-201ENST00000384683 107 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 AC244023.1-201ENST00000426884 112 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 RNU7-80P-201ENST00000459562 61 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 AC005840.1-201ENST00000498412 377 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 AC107027.2-201ENST00000512197 115 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 AC242498.1-201ENST00000604134 111 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
CX3CL1P78423 MIR302B-201ENST00000362188 73 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 RNA5SP432-201ENST00000362480 116 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 Y_RNA.454-201ENST00000384224 113 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 RNU6-994P-201ENST00000410507 111 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 RNU5E-9P-201ENST00000411164 104 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 FABP5P4-201ENST00000437203 171 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 RNU7-120P-201ENST00000459334 63 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 RNU7-45P-201ENST00000459460 63 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 Y_RNA.700-201ENST00000516806 100 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 SCARNA15-202ENST00000516881 127 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 MIR4498-201ENST00000577599 66 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 MIR4295-201ENST00000585286 85 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 HSPE1P19-201ENST00000603327 295 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 AL359821.1-201ENST00000605519 182 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 AL596211.1-201ENST00000569873 2277 ntBASIC0.87□□□□□ -2.27
CX3CL1P78423 Y_RNA.29-201ENST00000362570 113 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 Y_RNA.240-201ENST00000364469 95 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 SNORD38B-201ENST00000384690 67 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 SNORA26.6-201ENST00000391256 115 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 RNU6-602P-201ENST00000411155 105 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.86□□□□□ -2.27
CX3CL1P78423 UBL5P1-201ENST00000507979 193 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 AC108729.3-201ENST00000513484 108 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 RNU6-1149P-201ENST00000516810 97 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 AC091895.1-201ENST00000624494 256 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 SNORD38B-202ENST00000625943 69 ntBASIC0.86□□□□□ -2.27
CX3CL1P78423 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CX3CL1P78423 RNU6-682P-201ENST00000363843 106 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 Y_RNA.338-201ENST00000365320 114 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 RNU7-62P-201ENST00000458856 62 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 snoU13.21-201ENST00000459368 105 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 AC087343.1-201ENST00000477341 475 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 RNU6-861P-201ENST00000516745 106 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 RNU7-70P-201ENST00000516941 66 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 SNORA81.3-201ENST00000517283 198 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.85□□□□□ -2.27
CX3CL1P78423 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.85□□□□□ -2.27
CX3CL1P78423 MIR6717-201ENST00000622747 73 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 MTND5P32-201ENST00000560711 1802 ntBASIC0.85□□□□□ -2.27
CX3CL1P78423 RNU6-392P-201ENST00000364926 101 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 Y_RNA.337-201ENST00000365312 102 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 RNU6-53P-201ENST00000365367 106 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 Y_RNA.785-201ENST00000384290 109 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 AC067940.1-201ENST00000458411 300 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.84□□□□□ -2.27
CX3CL1P78423 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
CX3CL1P78423 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.84□□□□□ -2.27
CX3CL1P78423 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.84□□□□□ -2.27
CX3CL1P78423 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms