Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 Y_RNA.639-201ENST00000458981 102 ntBASIC0.16□□□□□ -2.38
IRX3P78415 RNA5SP153-201ENST00000516498 76 ntBASIC0.16□□□□□ -2.38
IRX3P78415 RNU6-135P-201ENST00000516769 101 ntBASIC0.16□□□□□ -2.38
IRX3P78415 RNU6-448P-201ENST00000517052 107 ntBASIC0.16□□□□□ -2.38
IRX3P78415 RNU6-897P-201ENST00000517135 105 ntBASIC0.16□□□□□ -2.38
IRX3P78415 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.16□□□□□ -2.38
IRX3P78415 RAC1P9-201ENST00000604990 392 ntBASIC0.16□□□□□ -2.38
IRX3P78415 MIR6740-201ENST00000618268 113 ntBASIC0.16□□□□□ -2.38
IRX3P78415 MIR4315-1-201ENST00000636800 73 ntBASIC0.16□□□□□ -2.38
IRX3P78415 MIR4315-2-201ENST00000640925 73 ntBASIC0.16□□□□□ -2.38
IRX3P78415 UBE2WP1-201ENST00000362030 340 ntBASIC0.15□□□□□ -2.39
IRX3P78415 SNORD118-201ENST00000363593 134 ntBASIC0.15□□□□□ -2.39
IRX3P78415 Y_RNA.494-201ENST00000384432 111 ntBASIC0.15□□□□□ -2.39
IRX3P78415 SNORA8.3-201ENST00000384679 139 ntBASIC0.15□□□□□ -2.39
IRX3P78415 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
IRX3P78415 RNU6-913P-201ENST00000390913 95 ntBASIC0.15□□□□□ -2.39
IRX3P78415 RNU6-938P-201ENST00000411285 103 ntBASIC0.15□□□□□ -2.39
IRX3P78415 PMCHL1-202ENST00000423102 261 ntBASIC0.15□□□□□ -2.39
IRX3P78415 RNU7-102P-201ENST00000458948 62 ntBASIC0.15□□□□□ -2.39
IRX3P78415 RNU6-998P-201ENST00000515894 101 ntBASIC0.15□□□□□ -2.39
IRX3P78415 SNORA40.15-201ENST00000516884 107 ntBASIC0.15□□□□□ -2.39
IRX3P78415 RNA5SP94-201ENST00000516917 108 ntBASIC0.15□□□□□ -2.39
IRX3P78415 AC007485.1-201ENST00000616755 206 ntBASIC0.15□□□□□ -2.39
IRX3P78415 AC010332.2-201ENST00000613083 1904 ntBASIC0.15□□□□□ -2.39
IRX3P78415 Y_RNA.152-201ENST00000363578 100 ntBASIC0.14□□□□□ -2.39
IRX3P78415 Y_RNA.217-201ENST00000364214 105 ntBASIC0.14□□□□□ -2.39
IRX3P78415 Y_RNA.303-201ENST00000364998 94 ntBASIC0.14□□□□□ -2.39
IRX3P78415 RNU6-679P-201ENST00000391003 106 ntBASIC0.14□□□□□ -2.39
IRX3P78415 RNU6-823P-201ENST00000391042 103 ntBASIC0.14□□□□□ -2.39
IRX3P78415 MIR548I3-201ENST00000408378 149 ntBASIC0.14□□□□□ -2.39
IRX3P78415 Y_RNA.641-201ENST00000459414 105 ntBASIC0.14□□□□□ -2.39
IRX3P78415 RNU6-1299P-201ENST00000516316 100 ntBASIC0.14□□□□□ -2.39
IRX3P78415 RNA5SP285-201ENST00000516619 119 ntBASIC0.14□□□□□ -2.39
IRX3P78415 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.14□□□□□ -2.39
IRX3P78415 MIR548S-201ENST00000581352 82 ntBASIC0.14□□□□□ -2.39
IRX3P78415 MIR5190-201ENST00000581537 80 ntBASIC0.14□□□□□ -2.39
IRX3P78415 AC006006.1-201ENST00000603082 144 ntBASIC0.14□□□□□ -2.39
IRX3P78415 RNA5SP517-201ENST00000364724 117 ntBASIC0.13□□□□□ -2.39
IRX3P78415 SNORD42.2-201ENST00000365570 69 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-1189P-201ENST00000383958 107 ntBASIC0.13□□□□□ -2.39
IRX3P78415 Y_RNA.454-201ENST00000384224 113 ntBASIC0.13□□□□□ -2.39
IRX3P78415 SNORD61-201ENST00000384252 73 ntBASIC0.13□□□□□ -2.39
IRX3P78415 SNRPGP12-201ENST00000449481 213 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU7-80P-201ENST00000459562 61 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-848P-201ENST00000515948 107 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-617P-201ENST00000516147 107 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-473P-201ENST00000516164 107 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-1049P-201ENST00000516414 107 ntBASIC0.13□□□□□ -2.39
IRX3P78415 MIR3152-201ENST00000579801 74 ntBASIC0.13□□□□□ -2.39
IRX3P78415 RNU6-102P-201ENST00000384485 104 ntBASIC0.12□□□□□ -2.39
IRX3P78415 MIR548A2-201ENST00000384956 97 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AC015818.7-201ENST00000428754 109 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AC087499.7-201ENST00000441958 109 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.12□□□□□ -2.39
IRX3P78415 RNU2-11P-201ENST00000459191 187 ntBASIC0.12□□□□□ -2.39
IRX3P78415 RNU6-469P-201ENST00000516253 101 ntBASIC0.12□□□□□ -2.39
IRX3P78415 RNU6-988P-201ENST00000519081 107 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AC131281.1-201ENST00000522984 164 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.12□□□□□ -2.39
IRX3P78415 MIR3678-201ENST00000578455 94 ntBASIC0.12□□□□□ -2.39
IRX3P78415 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
IRX3P78415 AC078938.1-201ENST00000620993 318 ntBASIC0.12□□□□□ -2.39
IRX3P78415 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.12□□□□□ -2.39
IRX3P78415 MIR302B-201ENST00000362188 73 ntBASIC0.11□□□□□ -2.39
IRX3P78415 Y_RNA.58-201ENST00000362807 102 ntBASIC0.11□□□□□ -2.39
IRX3P78415 Y_RNA.813-201ENST00000364639 102 ntBASIC0.11□□□□□ -2.39
IRX3P78415 RNY3P1-201ENST00000365085 102 ntBASIC0.11□□□□□ -2.39
IRX3P78415 Y_RNA.389-201ENST00000383924 113 ntBASIC0.11□□□□□ -2.39
IRX3P78415 Y_RNA.430-201ENST00000384081 110 ntBASIC0.11□□□□□ -2.39
IRX3P78415 RNU6-397P-201ENST00000516226 104 ntBASIC0.11□□□□□ -2.39
IRX3P78415 MIR4431-201ENST00000579990 94 ntBASIC0.11□□□□□ -2.39
IRX3P78415 MIR4795-201ENST00000584182 89 ntBASIC0.11□□□□□ -2.39
IRX3P78415 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
IRX3P78415 MIR30D-201ENST00000362283 70 ntBASIC0.1□□□□□ -2.39
IRX3P78415 Y_RNA.28-201ENST00000362554 111 ntBASIC0.1□□□□□ -2.39
IRX3P78415 RNU6-653P-201ENST00000363074 106 ntBASIC0.1□□□□□ -2.39
IRX3P78415 Y_RNA.174-201ENST00000363781 105 ntBASIC0.1□□□□□ -2.39
IRX3P78415 RNU6-770P-201ENST00000363929 105 ntBASIC0.1□□□□□ -2.39
IRX3P78415 Y_RNA.440-201ENST00000384120 114 ntBASIC0.1□□□□□ -2.39
IRX3P78415 SNORA8.2-201ENST00000384372 139 ntBASIC0.1□□□□□ -2.39
IRX3P78415 MIR626-201ENST00000385032 94 ntBASIC0.1□□□□□ -2.39
IRX3P78415 Y_RNA.645-201ENST00000391229 102 ntBASIC0.1□□□□□ -2.39
IRX3P78415 RNU2-59P-201ENST00000410482 191 ntBASIC0.1□□□□□ -2.39
IRX3P78415 MIR4801-201ENST00000582704 82 ntBASIC0.1□□□□□ -2.39
IRX3P78415 AC097639.2-201ENST00000603159 172 ntBASIC0.1□□□□□ -2.39
IRX3P78415 Y_RNA.66-201ENST00000362862 102 ntBASIC0.09□□□□□ -2.4
IRX3P78415 RNU6-1309P-201ENST00000363305 108 ntBASIC0.09□□□□□ -2.4
IRX3P78415 Y_RNA.432-201ENST00000384087 111 ntBASIC0.09□□□□□ -2.4
IRX3P78415 Y_RNA.542-201ENST00000384641 111 ntBASIC0.09□□□□□ -2.4
IRX3P78415 RPL39P25-201ENST00000449384 154 ntBASIC0.09□□□□□ -2.4
IRX3P78415 SNORD36C-201ENST00000516733 66 ntBASIC0.09□□□□□ -2.4
IRX3P78415 RNA5SP268-201ENST00000516828 124 ntBASIC0.09□□□□□ -2.4
IRX3P78415 AC069113.3-201ENST00000521019 150 ntBASIC0.09□□□□□ -2.4
IRX3P78415 AC112693.2-201ENST00000556538 232 ntBASIC0.09□□□□□ -2.4
IRX3P78415 AC008608.1-201ENST00000603910 127 ntBASIC0.09□□□□□ -2.4
IRX3P78415 MIR6717-201ENST00000622747 73 ntBASIC0.09□□□□□ -2.4
IRX3P78415 snoU18.1-201ENST00000629629 71 ntBASIC0.09□□□□□ -2.4
IRX3P78415 Y_RNA.634-201ENST00000364811 113 ntBASIC0.08□□□□□ -2.4
IRX3P78415 RNU6-893P-201ENST00000458841 100 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 255 ms