Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 MTCO2P24-201ENST00000515611 426 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 RNA5SP285-201ENST00000516619 119 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 Y_RNA.702-201ENST00000516843 96 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 MIR5190-201ENST00000581537 80 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 AL008718.3-201ENST00000610217 321 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 uc_338.16-201ENST00000621804 95 ntBASIC0.14□□□□□ -2.39
CCNA1P78396 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.14□□□□□ -2.39
CCNA1P78396 SNORA63.7-201ENST00000365579 123 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 MIR563-201ENST00000385080 79 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 MT-TF-201ENST00000387314 71 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 RNU6-823P-201ENST00000391042 103 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.13□□□□□ -2.39
CCNA1P78396 AC082651.2-201ENST00000496833 166 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 AC100767.1-201ENST00000528178 123 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 AC133485.4-201ENST00000561835 220 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 MIR3678-201ENST00000578455 94 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 AL133255.1-201ENST00000606374 441 ntBASIC0.13□□□□□ -2.39
CCNA1P78396 MIR342-201ENST00000362212 99 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 MIR30D-201ENST00000362283 70 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 RNU6-888P-201ENST00000363010 101 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 SNORD24-201ENST00000383884 75 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 Y_RNA.541-201ENST00000384640 113 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 RNU7-96P-201ENST00000459535 64 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 RNU6-998P-201ENST00000515894 101 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 RNU6-365P-201ENST00000517113 106 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.12□□□□□ -2.39
CCNA1P78396 MIR548S-201ENST00000581352 82 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 AC037487.3-201ENST00000606668 112 ntBASIC0.12□□□□□ -2.39
CCNA1P78396 Y_RNA.31-201ENST00000362574 102 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 RNA5SP117-201ENST00000365294 118 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.380-201ENST00000365663 111 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.395-201ENST00000383945 109 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.572-201ENST00000384757 98 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 MIR526A2-201ENST00000390198 65 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 SNORA53-201ENST00000391141 249 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 AC073261.1-201ENST00000429409 121 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 AF228730.3-201ENST00000436691 102 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.631-201ENST00000459607 101 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 RNA5SP395-201ENST00000516567 118 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 RNU6-448P-201ENST00000517052 107 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 AC006006.1-201ENST00000603082 144 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.802-201ENST00000614892 130 ntBASIC0.11□□□□□ -2.39
CCNA1P78396 Y_RNA.66-201ENST00000362862 102 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 snoU2_19.2-201ENST00000363024 80 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.91-201ENST00000363042 107 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.217-201ENST00000364214 105 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.389-201ENST00000383924 113 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 MIR215-201ENST00000384858 110 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 SNORD77.3-201ENST00000391113 65 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 RNU6-101P-201ENST00000410323 104 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.617-201ENST00000410920 90 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 RPL21P38-201ENST00000418090 167 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 MTND4LP30-201ENST00000454092 297 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.641-201ENST00000459414 105 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 RNU7-45P-201ENST00000459460 63 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 SNORA40.15-201ENST00000516884 107 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.1□□□□□ -2.39
CCNA1P78396 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.1□□□□□ -2.39
CCNA1P78396 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 AC090971.5-201ENST00000621102 293 ntBASIC0.1□□□□□ -2.39
CCNA1P78396 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.1□□□□□ -2.39
CCNA1P78396 Y_RNA.229-201ENST00000364347 113 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 Y_RNA.419-201ENST00000384041 102 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 RNU6-815P-201ENST00000384080 113 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 MIR1252-201ENST00000408861 65 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 RPL39P25-201ENST00000449384 154 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 AP003733.2-201ENST00000529409 171 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 snoU18.1-201ENST00000629629 71 ntBASIC0.09□□□□□ -2.4
CCNA1P78396 Y_RNA.24-201ENST00000362508 103 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 Y_RNA.42-201ENST00000362660 108 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 SNORA36.1-201ENST00000363424 132 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 RNU6-326P-201ENST00000365480 107 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 SNORD42.2-201ENST00000365570 69 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 MIR329-2-201ENST00000385029 84 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 SNORD93-201ENST00000408813 74 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 RNU4-83P-201ENST00000410863 133 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 TRBVB-201ENST00000477100 408 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 RNU6-504P-201ENST00000516568 104 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 RNU6-126P-201ENST00000516685 103 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 AC131281.1-201ENST00000522984 164 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.08□□□□□ -2.4
CCNA1P78396 AP001282.2-201ENST00000616149 309 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 MIR8066-201ENST00000617280 78 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
CCNA1P78396 Y_RNA.16-201ENST00000362421 102 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 RNU6-740P-201ENST00000364734 105 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 RNU6-806P-201ENST00000365147 105 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 RNU6-597P-201ENST00000365620 102 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 Y_RNA.440-201ENST00000384120 114 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 MIR644A-201ENST00000385262 94 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 AL731563.1-201ENST00000442202 214 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 RNU6-469P-201ENST00000516253 101 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
CCNA1P78396 Y_RNA.26-201ENST00000362539 101 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms