Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 HMGN1P33-201ENST00000432945 451 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AC002429.1-201ENST00000437672 148 ntBASIC0.95□□□□□ -2.26
PAX9P55771 RNU2-11P-201ENST00000459191 187 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.95□□□□□ -2.26
PAX9P55771 MIR8055-201ENST00000610739 97 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AL157834.3-201ENST00000615543 103 ntBASIC0.95□□□□□ -2.26
PAX9P55771 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AC008163.1-202ENST00000636004 2889 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.94□□□□□ -2.26
PAX9P55771 SNORA7.1-201ENST00000363750 139 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNY1P11-201ENST00000363759 113 ntBASIC0.94□□□□□ -2.26
PAX9P55771 Y_RNA.330-201ENST00000365230 109 ntBASIC0.94□□□□□ -2.26
PAX9P55771 Y_RNA.351-201ENST00000365436 96 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNU6-125P-201ENST00000384505 107 ntBASIC0.94□□□□□ -2.26
PAX9P55771 MIR548I3-201ENST00000408378 149 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNA5SP95-201ENST00000410319 137 ntBASIC0.94□□□□□ -2.26
PAX9P55771 AC063976.4-201ENST00000421971 163 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNU7-95P-201ENST00000459222 64 ntBASIC0.94□□□□□ -2.26
PAX9P55771 OR2A41P-201ENST00000473586 105 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNA5SP458-201ENST00000516188 119 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNU7-53P-201ENST00000516705 60 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNU6-1149P-201ENST00000516810 97 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNU11-2P-201ENST00000516898 142 ntBASIC0.94□□□□□ -2.26
PAX9P55771 RNA5SP404-201ENST00000517118 132 ntBASIC0.94□□□□□ -2.26
PAX9P55771 AC091932.4-201ENST00000623386 200 ntBASIC0.94□□□□□ -2.26
PAX9P55771 MTND5P32-201ENST00000560711 1802 ntBASIC0.94□□□□□ -2.26
PAX9P55771 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
PAX9P55771 Y_RNA.52-201ENST00000362760 96 ntBASIC0.93□□□□□ -2.26
PAX9P55771 Y_RNA.272-201ENST00000364696 102 ntBASIC0.93□□□□□ -2.26
PAX9P55771 RNU6-818P-201ENST00000364837 108 ntBASIC0.93□□□□□ -2.26
PAX9P55771 RNU6-886P-201ENST00000384319 105 ntBASIC0.93□□□□□ -2.26
PAX9P55771 MIR19B1-201ENST00000384829 87 ntBASIC0.93□□□□□ -2.26
PAX9P55771 RNU6-907P-201ENST00000390924 102 ntBASIC0.93□□□□□ -2.26
PAX9P55771 BTF3P4-201ENST00000418852 495 ntBASIC0.93□□□□□ -2.26
PAX9P55771 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.93□□□□□ -2.26
PAX9P55771 RNU7-45P-201ENST00000459460 63 ntBASIC0.93□□□□□ -2.26
PAX9P55771 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.93□□□□□ -2.26
PAX9P55771 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
PAX9P55771 Z97988.1-201ENST00000637697 135 ntBASIC0.93□□□□□ -2.26
PAX9P55771 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
PAX9P55771 RNU1-124P-201ENST00000363861 145 ntBASIC0.92□□□□□ -2.26
PAX9P55771 SNORA26.6-201ENST00000391256 115 ntBASIC0.92□□□□□ -2.26
PAX9P55771 RNU6-588P-201ENST00000410281 105 ntBASIC0.92□□□□□ -2.26
PAX9P55771 RNU6-613P-201ENST00000410412 108 ntBASIC0.92□□□□□ -2.26
PAX9P55771 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
PAX9P55771 RNU7-90P-201ENST00000459216 62 ntBASIC0.92□□□□□ -2.26
PAX9P55771 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
PAX9P55771 AC023827.1-201ENST00000569247 97 ntBASIC0.92□□□□□ -2.26
PAX9P55771 AC104465.1-201ENST00000611365 139 ntBASIC0.92□□□□□ -2.26
PAX9P55771 AL596211.1-201ENST00000569873 2277 ntBASIC0.91□□□□□ -2.26
PAX9P55771 RNU6-396P-201ENST00000365369 105 ntBASIC0.91□□□□□ -2.26
PAX9P55771 RNU6-1130P-201ENST00000365434 107 ntBASIC0.91□□□□□ -2.26
PAX9P55771 SNORA75.5-201ENST00000391291 81 ntBASIC0.91□□□□□ -2.26
PAX9P55771 RNU6-394P-201ENST00000410735 107 ntBASIC0.91□□□□□ -2.26
PAX9P55771 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC244023.1-201ENST00000426884 112 ntBASIC0.91□□□□□ -2.26
PAX9P55771 RNU7-80P-201ENST00000459562 61 ntBASIC0.91□□□□□ -2.26
PAX9P55771 MIR2115-201ENST00000516657 100 ntBASIC0.91□□□□□ -2.26
PAX9P55771 RNU2-60P-201ENST00000517290 128 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC036111.3-201ENST00000526389 112 ntBASIC0.91□□□□□ -2.26
PAX9P55771 MIR3646-201ENST00000578301 84 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
PAX9P55771 DNAJC19P2-201ENST00000593340 302 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC242498.1-201ENST00000604134 111 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC098479.1-201ENST00000609225 154 ntBASIC0.91□□□□□ -2.26
PAX9P55771 AC012676.2-201ENST00000619258 186 ntBASIC0.91□□□□□ -2.26
PAX9P55771 MIR6844-201ENST00000637122 62 ntBASIC0.91□□□□□ -2.26
PAX9P55771 Y_RNA.270-201ENST00000364693 104 ntBASIC0.9□□□□□ -2.27
PAX9P55771 RNU6-804P-201ENST00000384286 107 ntBASIC0.9□□□□□ -2.27
PAX9P55771 Y_RNA.497-201ENST00000384447 98 ntBASIC0.9□□□□□ -2.27
PAX9P55771 AP1B1P2-201ENST00000416196 106 ntBASIC0.9□□□□□ -2.27
PAX9P55771 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
PAX9P55771 RNA5SP236-201ENST00000516169 116 ntBASIC0.9□□□□□ -2.27
PAX9P55771 RNU7-40P-201ENST00000516397 64 ntBASIC0.9□□□□□ -2.27
PAX9P55771 AL353770.2-201ENST00000620024 78 ntBASIC0.9□□□□□ -2.27
PAX9P55771 SNORA22-201ENST00000383907 134 ntBASIC0.89□□□□□ -2.27
PAX9P55771 Y_RNA.454-201ENST00000384224 113 ntBASIC0.89□□□□□ -2.27
PAX9P55771 SNORA22C-201ENST00000384614 134 ntBASIC0.89□□□□□ -2.27
PAX9P55771 Y_RNA.555-201ENST00000384673 110 ntBASIC0.89□□□□□ -2.27
PAX9P55771 RNU6-205P-201ENST00000390858 107 ntBASIC0.89□□□□□ -2.27
PAX9P55771 RNU6-602P-201ENST00000411155 105 ntBASIC0.89□□□□□ -2.27
PAX9P55771 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.89□□□□□ -2.27
PAX9P55771 MIR3124-201ENST00000582636 67 ntBASIC0.89□□□□□ -2.27
PAX9P55771 MIR4781-201ENST00000585250 76 ntBASIC0.89□□□□□ -2.27
PAX9P55771 MIR6717-201ENST00000622747 73 ntBASIC0.89□□□□□ -2.27
PAX9P55771 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
PAX9P55771 MIR302B-201ENST00000362188 73 ntBASIC0.88□□□□□ -2.27
PAX9P55771 Y_RNA.251-201ENST00000364551 99 ntBASIC0.88□□□□□ -2.27
PAX9P55771 SNORA1.1-201ENST00000364671 133 ntBASIC0.88□□□□□ -2.27
PAX9P55771 RNU1-133P-201ENST00000364867 167 ntBASIC0.88□□□□□ -2.27
PAX9P55771 MT-TN-201ENST00000387400 73 ntBASIC0.88□□□□□ -2.27
PAX9P55771 Y_RNA.580-201ENST00000391004 95 ntBASIC0.88□□□□□ -2.27
PAX9P55771 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.88□□□□□ -2.27
PAX9P55771 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.88□□□□□ -2.27
PAX9P55771 MIR3144-201ENST00000579460 79 ntBASIC0.88□□□□□ -2.27
PAX9P55771 MIR3668-201ENST00000582138 75 ntBASIC0.88□□□□□ -2.27
PAX9P55771 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
PAX9P55771 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
PAX9P55771 MIR6078-201ENST00000611069 100 ntBASIC0.88□□□□□ -2.27
PAX9P55771 AC106800.4-201ENST00000614905 153 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms