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Protein–RNA interactions for Protein: P55283
CDH4, Cadherin-4, human
Predictions only
Length
916 aa
.
Download Table
Protein
RNA
Prediction (catRAPID)
Interaction (ENCODE eCLIP)
Gene
UniProt Accession
Transcript Symbol
Ensembl Transcript ID
Length
Transcript Status
Prediction Score
Prediction z-Score
p-Value
Fold Change
CDH4
P55283
Y_RNA.91-201
ENST00000363042
107 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
Y_RNA.128-201
ENST00000363391
112 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
Y_RNA.210-201
ENST00000364161
110 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
SNORA1.1-201
ENST00000364671
133 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
RNU6-484P-201
ENST00000384016
107 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
RNU6-211P-201
ENST00000384047
107 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
Y_RNA.455-201
ENST00000384230
98 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
SNORD12C-201
ENST00000386307
89 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
RNU6-679P-201
ENST00000391003
106 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
AL138752.1-201
ENST00000452964
351 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
RNU7-96P-201
ENST00000459535
64 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
AC108740.1-201
ENST00000498629
225 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
RNU6-504P-201
ENST00000516568
104 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
Y_RNA.711-201
ENST00000516993
102 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
MIR5093-201
ENST00000583199
100 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
AC006006.1-201
ENST00000603082
144 nt
BASIC
0.23
□□□□□ -2.37
CDH4
P55283
Y_RNA.84-201
ENST00000363011
104 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
SNORD44.1-201
ENST00000363202
61 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
Y_RNA.138-201
ENST00000363462
102 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
Y_RNA.158-201
ENST00000363651
101 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
Y_RNA.634-201
ENST00000364811
113 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
Y_RNA.440-201
ENST00000384120
114 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
Y_RNA.527-201
ENST00000384573
102 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
SNORA8.3-201
ENST00000384679
139 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
SNORD77.3-201
ENST00000391113
65 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
SNORA26.6-201
ENST00000391256
115 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
MIR548I3-201
ENST00000408378
149 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
ATP6V0E1P1-201
ENST00000412537
226 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
AL583859.1-201
ENST00000455871
335 nt
TSL 3
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
MTND5P22-201
ENST00000458380
195 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
RNU2-11P-201
ENST00000459191
187 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
SERF1AP1-201
ENST00000514575
187 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
RNU7-156P-201
ENST00000517214
74 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
AC134503.1-201
ENST00000633048
54 nt
BASIC
0.22
□□□□□ -2.37
CDH4
P55283
RNU6-1327P-201
ENST00000365302
105 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-364P-201
ENST00000384387
107 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
MIR518A1-201
ENST00000385068
85 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-1319P-201
ENST00000390855
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-747P-201
ENST00000390928
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-241P-201
ENST00000391148
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
MIR1257-201
ENST00000408490
117 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-447P-201
ENST00000410293
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-1118P-201
ENST00000410382
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-1076P-201
ENST00000410397
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-355P-201
ENST00000410427
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-791P-201
ENST00000410467
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-705P-201
ENST00000410601
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-1100P-201
ENST00000410691
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-860P-201
ENST00000410860
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU2-55P-201
ENST00000411146
174 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-1217P-201
ENST00000411276
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNU6-785P-201
ENST00000411324
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
SNRPGP8-201
ENST00000454064
226 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
AC068658.1-201
ENST00000507509
388 nt
TSL 2
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
SNORA25.12-201
ENST00000516202
82 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
RNA5SP94-201
ENST00000516917
108 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
MIR4680-201
ENST00000580906
66 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
AC097639.2-201
ENST00000603159
172 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
U6.90-201
ENST00000614007
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
U6.70-201
ENST00000620287
104 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
MIR924-201
ENST00000638017
53 nt
BASIC
0.21
□□□□□ -2.38
CDH4
P55283
MIR330-201
ENST00000362196
94 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
Y_RNA.153-201
ENST00000363615
91 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
Y_RNA.216-201
ENST00000364205
93 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
Y_RNA.275-201
ENST00000364726
110 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
Y_RNA.410-201
ENST00000383992
113 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
RNU6-1289P-201
ENST00000384431
106 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
MT-TF-201
ENST00000387314
71 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
MT-TT-201
ENST00000387460
66 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
AL358176.2-201
ENST00000425769
204 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
RNU6-1299P-201
ENST00000516316
100 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
RNU6-1338P-201
ENST00000516328
91 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
RNU6-1137P-201
ENST00000517073
99 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
AL122017.1-202
ENST00000570612
319 nt
TSL 5
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
MIR4514-201
ENST00000581410
57 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
KCNQ1OT1_5.1-201
ENST00000621902
226 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
MIR376A2-201
ENST00000636782
80 nt
BASIC
0.2
□□□□□ -2.38
CDH4
P55283
Y_RNA.7-201
ENST00000362352
102 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
Y_RNA.117-201
ENST00000363294
101 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
Y_RNA.152-201
ENST00000363578
100 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNU6-1189P-201
ENST00000383958
107 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
Y_RNA.460-201
ENST00000384255
102 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
MIR548P-201
ENST00000408336
84 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNU6-1203P-201
ENST00000410703
110 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
SNORA40.8-201
ENST00000411034
126 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNU7-45P-201
ENST00000459460
63 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
AL117351.2-201
ENST00000513571
157 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNU6-1143P-201
ENST00000516125
104 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNA5SP153-201
ENST00000516498
76 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
SCARNA24.2-201
ENST00000516968
130 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
AC104211.3-201
ENST00000518861
270 nt
TSL 3
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
AC004148.1-201
ENST00000571506
398 nt
TSL 5
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
HOTAIR_3.1-201
ENST00000611352
97 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
MIR8087-201
ENST00000612745
78 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
AP001282.2-201
ENST00000616149
309 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
AC078938.1-201
ENST00000620993
318 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
MIR6717-201
ENST00000622747
73 nt
BASIC
0.19
□□□□□ -2.38
CDH4
P55283
RNU6-349P-201
ENST00000362402
107 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
SNORD118-201
ENST00000363593
134 nt
BASIC
0.18
□□□□□ -2.38
CDH4
P55283
snoU2_19.4-201
ENST00000364329
80 nt
BASIC
0.18
□□□□□ -2.38
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Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms