Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.09□□□□□ -2.42
ACLYP53396 AC100767.1-201ENST00000528178 123 ntBASIC-0.09□□□□□ -2.42
ACLYP53396 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.09□□□□□ -2.42
ACLYP53396 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.09□□□□□ -2.42
ACLYP53396 MIR5692C2-201ENST00000577959 77 ntBASIC-0.09□□□□□ -2.42
ACLYP53396 AL132765.2-201ENST00000610812 351 ntBASIC-0.09□□□□□ -2.42
ACLYP53396 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.09□□□□□ -2.42
ACLYP53396 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 RNU6-888P-201ENST00000363010 101 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 RNU6-102P-201ENST00000384485 104 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.1□□□□□ -2.43
ACLYP53396 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 MIR7107-201ENST00000611489 80 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 AP001282.2-201ENST00000616149 309 ntBASIC-0.1□□□□□ -2.43
ACLYP53396 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
ACLYP53396 PCNPP3-201ENST00000393579 471 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 AF228730.3-201ENST00000436691 102 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 RNU6-976P-201ENST00000516086 111 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 RNU6-397P-201ENST00000516226 104 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 RNU6-126P-201ENST00000516685 103 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 RNU6-365P-201ENST00000517113 106 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 uc_338.22-201ENST00000622722 187 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 MIR6717-201ENST00000622747 73 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 MIR6828-201ENST00000636181 60 ntBASIC-0.11□□□□□ -2.43
ACLYP53396 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 SNORA26.6-201ENST00000391256 115 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 SNORD19B-201ENST00000459623 84 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.12□□□□□ -2.43
ACLYP53396 MIR376A1-201ENST00000616574 68 ntBASIC-0.12□□□□□ -2.43
ACLYP53396 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 SNORD114-5-201ENST00000362928 70 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 RNU6-923P-201ENST00000364753 107 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 SUMO1P3-201ENST00000439961 304 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 RNU6-504P-201ENST00000516568 104 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.13□□□□□ -2.43
ACLYP53396 AL662814.1-201ENST00000617364 121 ntBASIC-0.13□□□□□ -2.43
ACLYP53396 RNU4-90P-201ENST00000362773 141 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 SNORA2A-201ENST00000383885 135 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 RNU6-187P-201ENST00000384139 106 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 MIR526A2-201ENST00000390198 65 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 PMCHL1-202ENST00000423102 261 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 RPL39P25-201ENST00000449384 154 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 RNU6-475P-201ENST00000516073 104 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 SNORA31.14-201ENST00000516728 116 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 RNA5SP47-201ENST00000517230 109 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 AP003733.2-201ENST00000529409 171 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.14□□□□□ -2.43
ACLYP53396 AC006157.1-201ENST00000611750 366 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 MIR6082-201ENST00000613604 109 ntBASIC-0.14□□□□□ -2.43
ACLYP53396 MIR342-201ENST00000362212 99 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-127P-201ENST00000390897 107 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 U8.15-201ENST00000390947 134 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 SNORD115-46-201ENST00000390982 71 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 MIR1302-11-201ENST00000408051 138 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 MIR1302-9-201ENST00000408365 138 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 MIR1302-10-201ENST00000408734 138 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNA5SP237-201ENST00000410414 113 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU7-45P-201ENST00000459460 63 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-848P-201ENST00000515948 107 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-617P-201ENST00000516147 107 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-473P-201ENST00000516164 107 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-135P-201ENST00000516769 101 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 IGLVI-20-201ENST00000519296 130 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 MIR1302-2-201ENST00000607096 138 ntBASIC-0.15□□□□□ -2.43
ACLYP53396 RNU6-653P-201ENST00000363074 106 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 RNU6-403P-201ENST00000363163 104 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 AL022718.1-201ENST00000412004 84 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 FGF7P4-201ENST00000509595 295 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 RNU6-765P-201ENST00000516916 99 ntBASIC-0.16□□□□□ -2.44
ACLYP53396 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.16□□□□□ -2.44
ACLYP53396 MIR5688-201ENST00000580619 83 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms