Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.18□□□□□ -2.22
NEK3P51956 AC067940.1-201ENST00000458411 300 ntBASIC1.18□□□□□ -2.22
NEK3P51956 MIR5197-201ENST00000583721 112 ntBASIC1.18□□□□□ -2.22
NEK3P51956 Z97988.1-201ENST00000637697 135 ntBASIC1.18□□□□□ -2.22
NEK3P51956 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
NEK3P51956 RNU6-643P-201ENST00000384018 107 ntBASIC1.17□□□□□ -2.22
NEK3P51956 RNA5SP261-201ENST00000410536 106 ntBASIC1.17□□□□□ -2.22
NEK3P51956 PDCD5P2-201ENST00000507570 312 ntBASIC1.17□□□□□ -2.22
NEK3P51956 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
NEK3P51956 AC023827.1-201ENST00000569247 97 ntBASIC1.17□□□□□ -2.22
NEK3P51956 MIR8055-201ENST00000610739 97 ntBASIC1.17□□□□□ -2.22
NEK3P51956 AL136317.1-201ENST00000612653 226 ntBASIC1.17□□□□□ -2.22
NEK3P51956 AC141273.2-201ENST00000618989 130 ntBASIC1.17□□□□□ -2.22
NEK3P51956 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
NEK3P51956 RNU6-1020P-201ENST00000363684 107 ntBASIC1.16□□□□□ -2.22
NEK3P51956 RNU6-978P-201ENST00000364371 103 ntBASIC1.16□□□□□ -2.22
NEK3P51956 Y_RNA.515-201ENST00000384535 112 ntBASIC1.16□□□□□ -2.22
NEK3P51956 U7.7-201ENST00000459276 60 ntBASIC1.16□□□□□ -2.22
NEK3P51956 MRPS18CP4-201ENST00000535821 231 ntBASIC1.16□□□□□ -2.22
NEK3P51956 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
NEK3P51956 RNU6-654P-201ENST00000364373 107 ntBASIC1.15□□□□□ -2.23
NEK3P51956 SNORA2B-201ENST00000384583 137 ntBASIC1.15□□□□□ -2.23
NEK3P51956 SNORD38B-201ENST00000384690 67 ntBASIC1.15□□□□□ -2.23
NEK3P51956 RNU6-918P-201ENST00000391219 106 ntBASIC1.15□□□□□ -2.23
NEK3P51956 RNA5SP255-201ENST00000516370 107 ntBASIC1.15□□□□□ -2.23
NEK3P51956 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
NEK3P51956 MIR3129-201ENST00000581095 76 ntBASIC1.15□□□□□ -2.23
NEK3P51956 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
NEK3P51956 SNORD38B-202ENST00000625943 69 ntBASIC1.15□□□□□ -2.23
NEK3P51956 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NEK3P51956 RNU1-36P-201ENST00000365130 165 ntBASIC1.14□□□□□ -2.23
NEK3P51956 MIR548I3-201ENST00000408378 149 ntBASIC1.14□□□□□ -2.23
NEK3P51956 MIR1276-201ENST00000408707 83 ntBASIC1.14□□□□□ -2.23
NEK3P51956 RNU6-994P-201ENST00000410507 111 ntBASIC1.14□□□□□ -2.23
NEK3P51956 RNA5SP127-201ENST00000411051 133 ntBASIC1.14□□□□□ -2.23
NEK3P51956 RNU2-11P-201ENST00000459191 187 ntBASIC1.14□□□□□ -2.23
NEK3P51956 RNU6-1110P-201ENST00000516462 101 ntBASIC1.14□□□□□ -2.23
NEK3P51956 RNU6-1271P-201ENST00000517049 105 ntBASIC1.14□□□□□ -2.23
NEK3P51956 AC025627.3-201ENST00000582078 182 ntBASIC1.14□□□□□ -2.23
NEK3P51956 MIR4295-201ENST00000585286 85 ntBASIC1.14□□□□□ -2.23
NEK3P51956 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.14□□□□□ -2.23
NEK3P51956 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
NEK3P51956 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.14□□□□□ -2.23
NEK3P51956 MIR302B-201ENST00000362188 73 ntBASIC1.13□□□□□ -2.23
NEK3P51956 RNU6-312P-201ENST00000364629 107 ntBASIC1.13□□□□□ -2.23
NEK3P51956 SNORA1.1-201ENST00000364671 133 ntBASIC1.13□□□□□ -2.23
NEK3P51956 Y_RNA.351-201ENST00000365436 96 ntBASIC1.13□□□□□ -2.23
NEK3P51956 RNU6-125P-201ENST00000384505 107 ntBASIC1.13□□□□□ -2.23
NEK3P51956 Y_RNA.552-201ENST00000384665 112 ntBASIC1.13□□□□□ -2.23
NEK3P51956 MIR624-201ENST00000385217 97 ntBASIC1.13□□□□□ -2.23
NEK3P51956 RNU6-913P-201ENST00000390913 95 ntBASIC1.13□□□□□ -2.23
NEK3P51956 AC087343.1-201ENST00000477341 475 ntBASIC1.13□□□□□ -2.23
NEK3P51956 MIR4431-201ENST00000579990 94 ntBASIC1.13□□□□□ -2.23
NEK3P51956 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.13□□□□□ -2.23
NEK3P51956 Y_RNA.354-201ENST00000365448 111 ntBASIC1.12□□□□□ -2.23
NEK3P51956 Y_RNA.412-201ENST00000384001 104 ntBASIC1.12□□□□□ -2.23
NEK3P51956 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.12□□□□□ -2.23
NEK3P51956 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
NEK3P51956 SNORA25.7-201ENST00000364375 127 ntBASIC1.11□□□□□ -2.23
NEK3P51956 RNU6-597P-201ENST00000365620 102 ntBASIC1.11□□□□□ -2.23
NEK3P51956 Y_RNA.476-201ENST00000384347 108 ntBASIC1.11□□□□□ -2.23
NEK3P51956 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.11□□□□□ -2.23
NEK3P51956 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
NEK3P51956 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.11□□□□□ -2.23
NEK3P51956 RPS3AP1-201ENST00000413190 320 ntBASIC1.1□□□□□ -2.23
NEK3P51956 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.1□□□□□ -2.23
NEK3P51956 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.1□□□□□ -2.23
NEK3P51956 AC130289.1-201ENST00000577321 73 ntBASIC1.1□□□□□ -2.23
NEK3P51956 U6.106-201ENST00000636360 105 ntBASIC1.1□□□□□ -2.23
NEK3P51956 Y_RNA.191-201ENST00000363972 113 ntBASIC1.09□□□□□ -2.23
NEK3P51956 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.09□□□□□ -2.23
NEK3P51956 AL138752.1-201ENST00000452964 351 ntBASIC1.09□□□□□ -2.23
NEK3P51956 Y_RNA.700-201ENST00000516806 100 ntBASIC1.09□□□□□ -2.23
NEK3P51956 RNU7-70P-201ENST00000516941 66 ntBASIC1.09□□□□□ -2.23
NEK3P51956 AC072026.1-201ENST00000605023 201 ntBASIC1.09□□□□□ -2.23
NEK3P51956 RNU6-379P-201ENST00000363813 104 ntBASIC1.08□□□□□ -2.24
NEK3P51956 MIR1827-201ENST00000408549 66 ntBASIC1.08□□□□□ -2.24
NEK3P51956 AC244023.1-201ENST00000426884 112 ntBASIC1.08□□□□□ -2.24
NEK3P51956 MIR3152-201ENST00000579801 74 ntBASIC1.08□□□□□ -2.24
NEK3P51956 AC242498.1-201ENST00000604134 111 ntBASIC1.08□□□□□ -2.24
NEK3P51956 RNU6-94P-201ENST00000607728 107 ntBASIC1.08□□□□□ -2.24
NEK3P51956 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
NEK3P51956 MIR1-1-201ENST00000362147 71 ntBASIC1.07□□□□□ -2.24
NEK3P51956 Y_RNA.233-201ENST00000364407 101 ntBASIC1.07□□□□□ -2.24
NEK3P51956 MIR518E-201ENST00000385252 88 ntBASIC1.07□□□□□ -2.24
NEK3P51956 RNA5SP95-201ENST00000410319 137 ntBASIC1.07□□□□□ -2.24
NEK3P51956 RNU2-64P-201ENST00000411315 191 ntBASIC1.07□□□□□ -2.24
NEK3P51956 AC090844.1-201ENST00000422019 156 ntBASIC1.07□□□□□ -2.24
NEK3P51956 AC107027.2-201ENST00000512197 115 ntBASIC1.07□□□□□ -2.24
NEK3P51956 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
NEK3P51956 AC091932.4-201ENST00000623386 200 ntBASIC1.07□□□□□ -2.24
NEK3P51956 MIR376A2-201ENST00000636782 80 ntBASIC1.07□□□□□ -2.24
NEK3P51956 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
NEK3P51956 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
NEK3P51956 Y_RNA.430-201ENST00000384081 110 ntBASIC1.06□□□□□ -2.24
NEK3P51956 RNU6-602P-201ENST00000411155 105 ntBASIC1.06□□□□□ -2.24
NEK3P51956 AC006461.1-201ENST00000412637 326 ntBASIC1.06□□□□□ -2.24
NEK3P51956 RNU7-62P-201ENST00000458856 62 ntBASIC1.06□□□□□ -2.24
NEK3P51956 Y_RNA.644-201ENST00000459006 113 ntBASIC1.06□□□□□ -2.24
NEK3P51956 AC113410.1-201ENST00000505029 247 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms