Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 AL022718.1-201ENST00000412004 84 ntBASIC1.89□□□□□ -2.11
CLK3P49761 RPS3AP1-201ENST00000413190 320 ntBASIC1.89□□□□□ -2.11
CLK3P49761 RPS23P4-201ENST00000487908 423 ntBASIC1.89□□□□□ -2.11
CLK3P49761 RNU6-762P-201ENST00000517107 102 ntBASIC1.89□□□□□ -2.11
CLK3P49761 AC090821.2-201ENST00000523552 176 ntBASIC1.89□□□□□ -2.11
CLK3P49761 AL442128.1-201ENST00000615151 90 ntBASIC1.89□□□□□ -2.11
CLK3P49761 AC021613.1-201ENST00000623880 111 ntBASIC1.89□□□□□ -2.11
CLK3P49761 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
CLK3P49761 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CLK3P49761 SNORD115-19-201ENST00000363098 82 ntBASIC1.88□□□□□ -2.11
CLK3P49761 SNORD115-18-201ENST00000363293 82 ntBASIC1.88□□□□□ -2.11
CLK3P49761 RNU4-36P-201ENST00000364294 144 ntBASIC1.88□□□□□ -2.11
CLK3P49761 SNORA63D-201ENST00000364359 132 ntBASIC1.88□□□□□ -2.11
CLK3P49761 SNORD115-17-201ENST00000364612 82 ntBASIC1.88□□□□□ -2.11
CLK3P49761 Y_RNA.494-201ENST00000384432 111 ntBASIC1.88□□□□□ -2.11
CLK3P49761 SNORA64-201ENST00000384674 134 ntBASIC1.88□□□□□ -2.11
CLK3P49761 U8.16-201ENST00000391279 133 ntBASIC1.88□□□□□ -2.11
CLK3P49761 MIR1267-201ENST00000408723 78 ntBASIC1.88□□□□□ -2.11
CLK3P49761 AC107297.1-201ENST00000459991 176 ntBASIC1.88□□□□□ -2.11
CLK3P49761 SNORA31.4-201ENST00000516049 129 ntBASIC1.88□□□□□ -2.11
CLK3P49761 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
CLK3P49761 DEFB131E-201ENST00000532329 154 ntBASIC1.88□□□□□ -2.11
CLK3P49761 AC004812.1-201ENST00000540773 146 ntBASIC1.88□□□□□ -2.11
CLK3P49761 MIR4299-201ENST00000577899 72 ntBASIC1.88□□□□□ -2.11
CLK3P49761 AC087741.2-201ENST00000619415 172 ntBASIC1.88□□□□□ -2.11
CLK3P49761 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLK3P49761 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CLK3P49761 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.87□□□□□ -2.11
CLK3P49761 Y_RNA.107-201ENST00000363190 121 ntBASIC1.87□□□□□ -2.11
CLK3P49761 Y_RNA.299-201ENST00000364973 94 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RNA5SP126-201ENST00000365092 109 ntBASIC1.87□□□□□ -2.11
CLK3P49761 SNORA1.2-201ENST00000365189 134 ntBASIC1.87□□□□□ -2.11
CLK3P49761 Y_RNA.388-201ENST00000383919 113 ntBASIC1.87□□□□□ -2.11
CLK3P49761 Y_RNA.507-201ENST00000384500 99 ntBASIC1.87□□□□□ -2.11
CLK3P49761 Y_RNA.531-201ENST00000384589 121 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RNU6-296P-201ENST00000384608 107 ntBASIC1.87□□□□□ -2.11
CLK3P49761 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
CLK3P49761 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.87□□□□□ -2.11
CLK3P49761 HSPE1P9-201ENST00000440046 311 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RNU6-893P-201ENST00000458841 100 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RNU2-11P-201ENST00000459191 187 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
CLK3P49761 RNA5SP168-201ENST00000516642 112 ntBASIC1.87□□□□□ -2.11
CLK3P49761 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.87□□□□□ -2.11
CLK3P49761 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
CLK3P49761 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CLK3P49761 Y_RNA.10-201ENST00000362371 110 ntBASIC1.86□□□□□ -2.11
CLK3P49761 RNU6-1099P-201ENST00000363533 107 ntBASIC1.86□□□□□ -2.11
CLK3P49761 Y_RNA.466-201ENST00000384294 113 ntBASIC1.86□□□□□ -2.11
CLK3P49761 POLR2J4-204ENST00000418424 324 ntBASIC1.86□□□□□ -2.11
CLK3P49761 AL512326.2-201ENST00000426359 151 ntBASIC1.86□□□□□ -2.11
CLK3P49761 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLK3P49761 UBL5P3-201ENST00000475112 231 ntBASIC1.86□□□□□ -2.11
CLK3P49761 AC113410.1-201ENST00000505029 247 ntBASIC1.86□□□□□ -2.11
CLK3P49761 RNU7-12P-201ENST00000516030 62 ntBASIC1.86□□□□□ -2.11
CLK3P49761 SCARNA23-201ENST00000516060 130 ntBASIC1.86□□□□□ -2.11
CLK3P49761 RNA5SP481-201ENST00000516814 122 ntBASIC1.86□□□□□ -2.11
CLK3P49761 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
CLK3P49761 RNU7-181P-201ENST00000517234 74 ntBASIC1.86□□□□□ -2.11
CLK3P49761 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
CLK3P49761 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.86□□□□□ -2.11
CLK3P49761 MALAT1.1-201ENST00000618249 95 ntBASIC1.86□□□□□ -2.11
CLK3P49761 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
CLK3P49761 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CLK3P49761 RNY3P2-201ENST00000362918 102 ntBASIC1.85□□□□□ -2.11
CLK3P49761 SNORA67.3-201ENST00000384366 140 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNY1P7-201ENST00000384743 110 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-1031P-201ENST00000384773 107 ntBASIC1.85□□□□□ -2.11
CLK3P49761 MIR452-201ENST00000385020 85 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-1319P-201ENST00000390855 104 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-747P-201ENST00000390928 104 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-241P-201ENST00000391148 104 ntBASIC1.85□□□□□ -2.11
CLK3P49761 Y_RNA.601-201ENST00000410500 113 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-177P-201ENST00000411257 104 ntBASIC1.85□□□□□ -2.11
CLK3P49761 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
CLK3P49761 RNA5SP437-201ENST00000517249 129 ntBASIC1.85□□□□□ -2.11
CLK3P49761 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
CLK3P49761 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
CLK3P49761 FAM71BP1-201ENST00000604431 523 ntBASIC1.85□□□□□ -2.11
CLK3P49761 Y_RNA.783-201ENST00000613546 102 ntBASIC1.85□□□□□ -2.11
CLK3P49761 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
CLK3P49761 RNU6-363P-201ENST00000362895 105 ntBASIC1.84□□□□□ -2.11
CLK3P49761 Y_RNA.342-201ENST00000365352 113 ntBASIC1.84□□□□□ -2.11
CLK3P49761 SNORA70.7-201ENST00000384159 133 ntBASIC1.84□□□□□ -2.11
CLK3P49761 RPL23AP63-201ENST00000498752 471 ntBASIC1.84□□□□□ -2.11
CLK3P49761 MIR4694-201ENST00000578534 80 ntBASIC1.84□□□□□ -2.11
CLK3P49761 MIR3152-201ENST00000579801 74 ntBASIC1.84□□□□□ -2.11
CLK3P49761 MIR4713-201ENST00000582691 75 ntBASIC1.84□□□□□ -2.11
CLK3P49761 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
CLK3P49761 AC095038.3-201ENST00000634439 195 ntBASIC1.84□□□□□ -2.11
CLK3P49761 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
CLK3P49761 SNORD115-2-201ENST00000362842 82 ntBASIC1.83□□□□□ -2.12
CLK3P49761 SNORD115-20-201ENST00000365099 82 ntBASIC1.83□□□□□ -2.12
CLK3P49761 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
CLK3P49761 Y_RNA.370-201ENST00000365589 108 ntBASIC1.83□□□□□ -2.12
CLK3P49761 RNU6-409P-201ENST00000384114 104 ntBASIC1.83□□□□□ -2.12
CLK3P49761 MIR136-201ENST00000385207 82 ntBASIC1.83□□□□□ -2.12
CLK3P49761 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CLK3P49761 AL023284.1-201ENST00000403956 276 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms