Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 SNORD115-40-201ENST00000606510 82 ntBASIC1.59□□□□□ -2.15
THBS3P49746 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
THBS3P49746 ZNF355P-201ENST00000427301 3216 ntBASIC1.59□□□□□ -2.16
THBS3P49746 MIR548D2-201ENST00000384955 97 ntBASIC1.58□□□□□ -2.16
THBS3P49746 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
THBS3P49746 MIR764-201ENST00000390811 85 ntBASIC1.58□□□□□ -2.16
THBS3P49746 RNA5SP144-201ENST00000410846 116 ntBASIC1.58□□□□□ -2.16
THBS3P49746 AL035398.1-201ENST00000430869 322 ntBASIC1.58□□□□□ -2.16
THBS3P49746 RNU2-11P-201ENST00000459191 187 ntBASIC1.58□□□□□ -2.16
THBS3P49746 RNU7-45P-201ENST00000459460 63 ntBASIC1.58□□□□□ -2.16
THBS3P49746 RNU7-96P-201ENST00000459535 64 ntBASIC1.58□□□□□ -2.16
THBS3P49746 AC099513.1-201ENST00000490423 301 ntBASIC1.58□□□□□ -2.16
THBS3P49746 RNU2-19P-201ENST00000517288 84 ntBASIC1.58□□□□□ -2.16
THBS3P49746 AC068339.1-201ENST00000526965 141 ntBASIC1.58□□□□□ -2.16
THBS3P49746 MIR4778-201ENST00000577635 80 ntBASIC1.58□□□□□ -2.16
THBS3P49746 MIR5009-201ENST00000578736 100 ntBASIC1.58□□□□□ -2.16
THBS3P49746 AC021506.2-201ENST00000612354 169 ntBASIC1.58□□□□□ -2.16
THBS3P49746 AP001318.4-201ENST00000616637 121 ntBASIC1.58□□□□□ -2.16
THBS3P49746 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.58□□□□□ -2.16
THBS3P49746 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
THBS3P49746 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
THBS3P49746 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.57□□□□□ -2.16
THBS3P49746 AC019129.1-201ENST00000403786 261 ntBASIC1.57□□□□□ -2.16
THBS3P49746 AL512326.2-201ENST00000426359 151 ntBASIC1.57□□□□□ -2.16
THBS3P49746 MIR4287-201ENST00000579398 78 ntBASIC1.57□□□□□ -2.16
THBS3P49746 MIR3163-201ENST00000581592 73 ntBASIC1.57□□□□□ -2.16
THBS3P49746 AC021613.1-201ENST00000623880 111 ntBASIC1.57□□□□□ -2.16
THBS3P49746 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.57□□□□□ -2.16
THBS3P49746 MIR302B-201ENST00000362188 73 ntBASIC1.56□□□□□ -2.16
THBS3P49746 MIR526A1-201ENST00000384897 85 ntBASIC1.56□□□□□ -2.16
THBS3P49746 MIR590-201ENST00000385008 97 ntBASIC1.56□□□□□ -2.16
THBS3P49746 MIR452-201ENST00000385020 85 ntBASIC1.56□□□□□ -2.16
THBS3P49746 SNORD28B-201ENST00000390993 75 ntBASIC1.56□□□□□ -2.16
THBS3P49746 POLR2J4-204ENST00000418424 324 ntBASIC1.56□□□□□ -2.16
THBS3P49746 RPL31P63-201ENST00000422565 375 ntBASIC1.56□□□□□ -2.16
THBS3P49746 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.56□□□□□ -2.16
THBS3P49746 RNU6-109P-201ENST00000516364 107 ntBASIC1.56□□□□□ -2.16
THBS3P49746 RNU6-184P-201ENST00000516514 107 ntBASIC1.56□□□□□ -2.16
THBS3P49746 RNU7-6P-201ENST00000516845 62 ntBASIC1.56□□□□□ -2.16
THBS3P49746 RNU6-295P-201ENST00000516901 104 ntBASIC1.56□□□□□ -2.16
THBS3P49746 AC004812.1-201ENST00000540773 146 ntBASIC1.56□□□□□ -2.16
THBS3P49746 MIR4709-201ENST00000577272 72 ntBASIC1.56□□□□□ -2.16
THBS3P49746 AL513534.2-201ENST00000603836 250 ntBASIC1.56□□□□□ -2.16
THBS3P49746 AL627230.6-201ENST00000611129 280 ntBASIC1.56□□□□□ -2.16
THBS3P49746 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.56□□□□□ -2.16
THBS3P49746 AC095038.3-201ENST00000634439 195 ntBASIC1.56□□□□□ -2.16
THBS3P49746 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.55□□□□□ -2.16
THBS3P49746 Y_RNA.369-201ENST00000365568 117 ntBASIC1.55□□□□□ -2.16
THBS3P49746 Y_RNA.370-201ENST00000365589 108 ntBASIC1.55□□□□□ -2.16
THBS3P49746 MIR136-201ENST00000385207 82 ntBASIC1.55□□□□□ -2.16
THBS3P49746 U8.13-201ENST00000390842 128 ntBASIC1.55□□□□□ -2.16
THBS3P49746 RNU6-482P-201ENST00000391068 107 ntBASIC1.55□□□□□ -2.16
THBS3P49746 RNA5SP489-201ENST00000410986 109 ntBASIC1.55□□□□□ -2.16
THBS3P49746 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
THBS3P49746 RNU6-548P-201ENST00000517083 115 ntBASIC1.55□□□□□ -2.16
THBS3P49746 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
THBS3P49746 Y_RNA.171-201ENST00000363760 102 ntBASIC1.54□□□□□ -2.16
THBS3P49746 MIR583-201ENST00000384846 75 ntBASIC1.54□□□□□ -2.16
THBS3P49746 MIR660-201ENST00000385235 97 ntBASIC1.54□□□□□ -2.16
THBS3P49746 SNORA26.9-201ENST00000391322 122 ntBASIC1.54□□□□□ -2.16
THBS3P49746 RNU6-1190P-201ENST00000410811 104 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AL022718.1-201ENST00000412004 84 ntBASIC1.54□□□□□ -2.16
THBS3P49746 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
THBS3P49746 RPS23P4-201ENST00000487908 423 ntBASIC1.54□□□□□ -2.16
THBS3P49746 RNA5SP182-201ENST00000516064 82 ntBASIC1.54□□□□□ -2.16
THBS3P49746 RNU6-1258P-201ENST00000516911 111 ntBASIC1.54□□□□□ -2.16
THBS3P49746 RNU6-958P-201ENST00000516995 106 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AC141557.1-201ENST00000540982 400 ntBASIC1.54□□□□□ -2.16
THBS3P49746 MIR4529-201ENST00000578110 78 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.54□□□□□ -2.16
THBS3P49746 MIR548AR-201ENST00000582191 57 ntBASIC1.54□□□□□ -2.16
THBS3P49746 SNRPGP19-201ENST00000603826 189 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AC087741.2-201ENST00000619415 172 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
THBS3P49746 AL162726.3-218ENST00000636401 95 ntBASIC1.54□□□□□ -2.16
THBS3P49746 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
THBS3P49746 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
THBS3P49746 SNORA16.1-201ENST00000364597 132 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-1131P-201ENST00000364955 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 SNORA1.2-201ENST00000365189 134 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-49P-201ENST00000384256 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-1113P-201ENST00000384348 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 Y_RNA.531-201ENST00000384589 121 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-816P-201ENST00000390914 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-1268P-201ENST00000391214 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU6-1239P-201ENST00000391310 107 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNA5SP100-201ENST00000410903 110 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNA5SP59-201ENST00000410922 110 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNA5SP450-201ENST00000411206 102 ntBASIC1.53□□□□□ -2.16
THBS3P49746 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RPL39P25-201ENST00000449384 154 ntBASIC1.53□□□□□ -2.16
THBS3P49746 RNU7-67P-201ENST00000459003 62 ntBASIC1.53□□□□□ -2.16
THBS3P49746 SNORD123-201ENST00000459473 70 ntBASIC1.53□□□□□ -2.16
THBS3P49746 AC113410.1-201ENST00000505029 247 ntBASIC1.53□□□□□ -2.16
THBS3P49746 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.53□□□□□ -2.16
THBS3P49746 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.53□□□□□ -2.16
THBS3P49746 AC024614.2-201ENST00000577584 372 ntBASIC1.53□□□□□ -2.16
THBS3P49746 Y_RNA.773-201ENST00000607168 90 ntBASIC1.53□□□□□ -2.16
THBS3P49746 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.53□□□□□ -2.16
THBS3P49746 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms