Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RNU7-53P-201ENST00000516705 60 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 RNU6-1153P-201ENST00000516760 105 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
CX3CR1P49238 AP001094.1-201ENST00000579805 193 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.27□□□□□ -2.37
CX3CR1P49238 AC097639.2-201ENST00000603159 172 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 AL078603.1-201ENST00000603824 313 ntBASIC0.27□□□□□ -2.37
CX3CR1P49238 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.27□□□□□ -2.37
CX3CR1P49238 Y_RNA.7-201ENST00000362352 102 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 Y_RNA.237-201ENST00000364439 102 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 SNORA1.1-201ENST00000364671 133 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 RNU6-679P-201ENST00000391003 106 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 RNU6-985P-201ENST00000410182 104 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 AC113618.1-201ENST00000416747 285 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 RNU6-504P-201ENST00000516568 104 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 MIR5688-201ENST00000580619 83 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 SNORD92-201ENST00000585078 85 ntBASIC0.26□□□□□ -2.37
CX3CR1P49238 MIR342-201ENST00000362212 99 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 SNORA33.2-201ENST00000365413 134 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 AL606845.1-201ENST00000404881 255 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 RNU7-96P-201ENST00000459535 64 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.25□□□□□ -2.37
CX3CR1P49238 RNA5SP94-201ENST00000516917 108 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 RNU7-156P-201ENST00000517214 74 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 AC037487.3-201ENST00000606668 112 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 MIR8066-201ENST00000617280 78 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.25□□□□□ -2.37
CX3CR1P49238 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.25□□□□□ -2.37
CX3CR1P49238 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 Y_RNA.44-201ENST00000362676 108 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 RNU6-1189P-201ENST00000383958 107 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 RNU6-342P-201ENST00000384521 104 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 MT-TW-201ENST00000387382 68 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 Y_RNA.617-201ENST00000410920 90 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 AC096949.1-201ENST00000412047 152 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 RNU6-1299P-201ENST00000516316 100 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 Y_RNA.701-201ENST00000516812 110 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 AL442663.2-201ENST00000554385 511 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 MIR4643-201ENST00000577473 78 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 MIR4711-201ENST00000578274 70 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 AL356055.1-201ENST00000602528 446 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 AL442067.1-201ENST00000613261 223 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 MIR6717-201ENST00000622747 73 ntBASIC0.24□□□□□ -2.37
CX3CR1P49238 SNORD44.1-201ENST00000363202 61 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 SNORA36.1-201ENST00000363424 132 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 SNORA63C-201ENST00000364578 129 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 VTRNA1-3-201ENST00000365645 89 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 Y_RNA.432-201ENST00000384087 111 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 MIR216A-201ENST00000385063 110 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 RNU6-1109P-201ENST00000391187 107 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 MIR1257-201ENST00000408490 117 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 RNU2-70P-201ENST00000410718 179 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 AC108740.1-201ENST00000498629 225 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 RNU6-1143P-201ENST00000516125 104 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.23□□□□□ -2.37
CX3CR1P49238 MIR3129-201ENST00000581095 76 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 SNORA25.18-201ENST00000607153 114 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
CX3CR1P49238 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.82-201ENST00000363000 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.92-201ENST00000363043 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 RNU6-653P-201ENST00000363074 106 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.235-201ENST00000364412 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.306-201ENST00000365015 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.312-201ENST00000365089 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.322-201ENST00000365151 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.483-201ENST00000384380 101 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 RNU6-364P-201ENST00000384387 107 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MIR518A1-201ENST00000385068 85 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MIR616-201ENST00000385293 97 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 RNU6-381P-201ENST00000391259 108 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MIR936-201ENST00000401264 98 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 RNU2-55P-201ENST00000411146 174 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.650-201ENST00000459002 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MTATP8P1-201ENST00000467115 207 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 TRBVB-201ENST00000477100 408 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 RNA5SP153-201ENST00000516498 76 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.777-201ENST00000516982 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MIR3678-201ENST00000578455 94 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 MIR4282-201ENST00000583613 67 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.771-201ENST00000598668 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 AC011921.3-201ENST00000605540 361 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 U2.14-201ENST00000615943 113 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 AL365265.1-201ENST00000621045 234 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.789-201ENST00000622480 102 ntBASIC0.22□□□□□ -2.37
CX3CR1P49238 Y_RNA.42-201ENST00000362660 108 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 Y_RNA.122-201ENST00000363331 96 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 Y_RNA.416-201ENST00000384014 113 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 MT-TF-201ENST00000387314 71 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-1319P-201ENST00000390855 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-747P-201ENST00000390928 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-241P-201ENST00000391148 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-447P-201ENST00000410293 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-1118P-201ENST00000410382 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-1076P-201ENST00000410397 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-355P-201ENST00000410427 104 ntBASIC0.21□□□□□ -2.38
CX3CR1P49238 RNU6-791P-201ENST00000410467 104 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms