Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 Y_RNA.91-201ENST00000363042 107 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 SNORD44.1-201ENST00000363202 61 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.138-201ENST00000363462 102 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.158-201ENST00000363651 101 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.634-201ENST00000364811 113 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 RNU6-484P-201ENST00000384016 107 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.440-201ENST00000384120 114 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 SNORA8.3-201ENST00000384679 139 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 SNORD77.3-201ENST00000391113 65 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.22□□□□□ -2.37
CSNK1A1P48729 MTND5P22-201ENST00000458380 195 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 RNU7-96P-201ENST00000459535 64 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 RNU6-126P-201ENST00000516685 103 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.711-201ENST00000516993 102 ntBASIC0.22□□□□□ -2.37
CSNK1A1P48729 Y_RNA.7-201ENST00000362352 102 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 Y_RNA.216-201ENST00000364205 93 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 RNU6-1289P-201ENST00000384431 106 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 MT-TT-201ENST00000387460 66 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 SNORA26.6-201ENST00000391256 115 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 MIR548I3-201ENST00000408378 149 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 MIR1257-201ENST00000408490 117 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 SNRPGP8-201ENST00000454064 226 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 SERF1AP1-201ENST00000514575 187 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 SNORA25.12-201ENST00000516202 82 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 RNU6-1299P-201ENST00000516316 100 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 RNU6-1338P-201ENST00000516328 91 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 RNA5SP94-201ENST00000516917 108 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 SCARNA24.2-201ENST00000516968 130 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 AC134503.1-201ENST00000633048 54 ntBASIC0.21□□□□□ -2.38
CSNK1A1P48729 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
CSNK1A1P48729 Y_RNA.117-201ENST00000363294 101 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 Y_RNA.410-201ENST00000383992 113 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 SNORA40.8-201ENST00000411034 126 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 RNU2-55P-201ENST00000411146 174 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 RNU6-1137P-201ENST00000517073 99 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR3678-201ENST00000578455 94 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR4680-201ENST00000580906 66 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR6717-201ENST00000622747 73 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
CSNK1A1P48729 MIR342-201ENST00000362212 99 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 Y_RNA.152-201ENST00000363578 100 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 Y_RNA.153-201ENST00000363615 91 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 Y_RNA.275-201ENST00000364726 110 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 RNU6-1189P-201ENST00000383958 107 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 SNORA1-201ENST00000384107 130 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.19□□□□□ -2.38
CSNK1A1P48729 RNU7-45P-201ENST00000459460 63 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 snoU13.18-201ENST00000459483 104 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.19□□□□□ -2.38
CSNK1A1P48729 AL117351.2-201ENST00000513571 157 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 RNU6-1143P-201ENST00000516125 104 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 RNA5SP153-201ENST00000516498 76 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.19□□□□□ -2.38
CSNK1A1P48729 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.19□□□□□ -2.38
CSNK1A1P48729 MIR4431-201ENST00000579990 94 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 AP001282.2-201ENST00000616149 309 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.19□□□□□ -2.38
CSNK1A1P48729 AC078938.1-201ENST00000620993 318 ntBASIC0.19□□□□□ -2.38
CSNK1A1P48729 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 snoU2_19.4-201ENST00000364329 80 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 Y_RNA.269-201ENST00000364685 89 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-740P-201ENST00000364734 105 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 Y_RNA.304-201ENST00000365011 112 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 Y_RNA.460-201ENST00000384255 102 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 MIR598-201ENST00000384868 97 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 SNORA26-201ENST00000391286 122 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 MIR548P-201ENST00000408336 84 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-1203P-201ENST00000410703 110 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU2-70P-201ENST00000410718 179 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-651P-201ENST00000411040 105 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 Y_RNA.622-201ENST00000411091 108 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-863P-201ENST00000515989 104 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-453P-201ENST00000516819 85 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 RNU6-448P-201ENST00000517052 107 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 AC022523.2-201ENST00000561045 150 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 AC097639.2-201ENST00000603159 172 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.18□□□□□ -2.38
CSNK1A1P48729 Y_RNA.23-201ENST00000362496 106 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 SNORD114-23-201ENST00000363536 72 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 RNA5SP117-201ENST00000365294 118 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 RNU6-597P-201ENST00000365620 102 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 Y_RNA.432-201ENST00000384087 111 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 RNU6-1228P-201ENST00000391014 107 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.17□□□□□ -2.38
CSNK1A1P48729 AC020661.2-201ENST00000560114 134 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 MIR3171-201ENST00000584270 74 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 MIR8066-201ENST00000617280 78 ntBASIC0.17□□□□□ -2.38
CSNK1A1P48729 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 SNORA36.1-201ENST00000363424 132 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 RNY1-201ENST00000364228 113 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 RNU5E-4P-201ENST00000364931 120 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 Y_RNA.351-201ENST00000365436 96 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 RNY3P5-201ENST00000384127 102 ntBASIC0.16□□□□□ -2.38
CSNK1A1P48729 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 171.2 ms