Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MIR610-201ENST00000385139 96 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR643-201ENST00000385267 97 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR892B-201ENST00000401279 77 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 snoU13.19-201ENST00000459148 104 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 MIR4493-201ENST00000584016 73 ntBASIC-0.01□□□□□ -2.41
BRCA1P38398 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 MIR215-201ENST00000384858 110 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
BRCA1P38398 SNORD77.3-201ENST00000391113 65 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 RPL21P38-201ENST00000418090 167 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 BTF3P11-201ENST00000426582 477 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 AC138869.1-201ENST00000568623 124 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 AC096720.1-201ENST00000604441 183 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 AC124312.5-201ENST00000604451 268 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 RAC1P9-201ENST00000604990 392 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.02□□□□□ -2.41
BRCA1P38398 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 SNORA63.7-201ENST00000365579 123 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 RNA5SP268-201ENST00000516828 124 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 AC133485.4-201ENST00000561835 220 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 MIR5688-201ENST00000580619 83 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 AC108676.2-201ENST00000605225 163 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 SNORD113-8-201ENST00000363497 74 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 RNU6-923P-201ENST00000364753 107 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 MTCO2P24-201ENST00000515611 426 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 AC131281.1-201ENST00000522984 164 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 MIR4431-201ENST00000579990 94 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 RPS29P30-201ENST00000600975 111 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 AC090574.1-201ENST00000623186 233 ntBASIC-0.03□□□□□ -2.41
BRCA1P38398 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 SNORA8.3-201ENST00000384679 139 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 MIR548I3-201ENST00000408378 149 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 RNU6-504P-201ENST00000516568 104 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 MIR4662B-201ENST00000579498 81 ntBASIC-0.04□□□□□ -2.42
BRCA1P38398 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.04□□□□□ -2.42
BRCA1P38398 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 SNORA36.1-201ENST00000363424 132 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU6-949P-201ENST00000384040 107 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU6-815P-201ENST00000384080 113 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU6-913P-201ENST00000390913 95 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 SNORD77.4-201ENST00000516158 81 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 SNORA20.3-201ENST00000516880 132 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU1-115P-201ENST00000365329 160 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 C8orf59P2-201ENST00000603441 271 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.05□□□□□ -2.42
BRCA1P38398 RNU4-73P-201ENST00000363164 141 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 SNORD115-46-201ENST00000390982 71 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 SNORA26-201ENST00000391286 122 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 RNU6-875P-201ENST00000516488 106 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 RNU6-135P-201ENST00000516769 101 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 MIR4290-201ENST00000583807 95 ntBASIC-0.06□□□□□ -2.42
BRCA1P38398 SNORA42.1-201ENST00000363515 137 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU4-10P-201ENST00000364383 140 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU4-70P-201ENST00000384579 139 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU6-938P-201ENST00000411285 103 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU6-397P-201ENST00000516226 104 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.07□□□□□ -2.42
BRCA1P38398 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.07□□□□□ -2.42
BRCA1P38398 MIR4743-201ENST00000584576 69 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 AP001282.2-201ENST00000616149 309 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 AC244669.1-204ENST00000621564 178 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU6-403P-201ENST00000363163 104 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 SNORD61-201ENST00000384252 73 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 MIR593-201ENST00000384856 100 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 MIR760-201ENST00000390220 80 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 AC069271.1-201ENST00000445577 156 ntBASIC-0.07□□□□□ -2.42
BRCA1P38398 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms