Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-241P-201ENST00000391148 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 SNORA26.6-201ENST00000391256 115 ntBASIC0.18□□□□□ -2.38
RORAP35398 MIR548I3-201ENST00000408378 149 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-447P-201ENST00000410293 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-1118P-201ENST00000410382 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-1076P-201ENST00000410397 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-355P-201ENST00000410427 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-791P-201ENST00000410467 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-705P-201ENST00000410601 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-1100P-201ENST00000410691 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-860P-201ENST00000410860 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-1217P-201ENST00000411276 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-785P-201ENST00000411324 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.18□□□□□ -2.38
RORAP35398 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.18□□□□□ -2.38
RORAP35398 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.18□□□□□ -2.38
RORAP35398 RNU2-11P-201ENST00000459191 187 ntBASIC0.18□□□□□ -2.38
RORAP35398 RNU6-998P-201ENST00000515894 101 ntBASIC0.18□□□□□ -2.38
RORAP35398 AC131281.1-201ENST00000522984 164 ntBASIC0.18□□□□□ -2.38
RORAP35398 AC022523.2-201ENST00000561045 150 ntBASIC0.18□□□□□ -2.38
RORAP35398 MIR4801-201ENST00000582704 82 ntBASIC0.18□□□□□ -2.38
RORAP35398 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
RORAP35398 U6.90-201ENST00000614007 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 U6.70-201ENST00000620287 104 ntBASIC0.18□□□□□ -2.38
RORAP35398 uc_338.16-201ENST00000621804 95 ntBASIC0.18□□□□□ -2.38
RORAP35398 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.18□□□□□ -2.38
RORAP35398 Y_RNA.16-201ENST00000362421 102 ntBASIC0.17□□□□□ -2.38
RORAP35398 Y_RNA.91-201ENST00000363042 107 ntBASIC0.17□□□□□ -2.38
RORAP35398 Y_RNA.229-201ENST00000364347 113 ntBASIC0.17□□□□□ -2.38
RORAP35398 RNU6-484P-201ENST00000384016 107 ntBASIC0.17□□□□□ -2.38
RORAP35398 RNU6-474P-201ENST00000384243 107 ntBASIC0.17□□□□□ -2.38
RORAP35398 SNORA8.2-201ENST00000384372 139 ntBASIC0.17□□□□□ -2.38
RORAP35398 SNORA27.4-201ENST00000516650 95 ntBASIC0.17□□□□□ -2.38
RORAP35398 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
RORAP35398 MIR376A2-201ENST00000636782 80 ntBASIC0.17□□□□□ -2.38
RORAP35398 MTND4P29-201ENST00000503122 1372 ntBASIC0.17□□□□□ -2.38
RORAP35398 SNORA25.1-201ENST00000362326 128 ntBASIC0.16□□□□□ -2.38
RORAP35398 SNORA36.1-201ENST00000363424 132 ntBASIC0.16□□□□□ -2.38
RORAP35398 Y_RNA.440-201ENST00000384120 114 ntBASIC0.16□□□□□ -2.38
RORAP35398 MT-TF-201ENST00000387314 71 ntBASIC0.16□□□□□ -2.38
RORAP35398 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
RORAP35398 SNORD77.3-201ENST00000391113 65 ntBASIC0.16□□□□□ -2.38
RORAP35398 RNU7-96P-201ENST00000459535 64 ntBASIC0.16□□□□□ -2.38
RORAP35398 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
RORAP35398 RNU6-365P-201ENST00000517113 106 ntBASIC0.16□□□□□ -2.38
RORAP35398 AP003733.2-201ENST00000529409 171 ntBASIC0.16□□□□□ -2.38
RORAP35398 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.16□□□□□ -2.38
RORAP35398 Y_RNA.802-201ENST00000614892 130 ntBASIC0.16□□□□□ -2.38
RORAP35398 MIR8066-201ENST00000617280 78 ntBASIC0.16□□□□□ -2.38
RORAP35398 Y_RNA.24-201ENST00000362508 103 ntBASIC0.15□□□□□ -2.39
RORAP35398 Y_RNA.28-201ENST00000362554 111 ntBASIC0.15□□□□□ -2.39
RORAP35398 RNU6-740P-201ENST00000364734 105 ntBASIC0.15□□□□□ -2.39
RORAP35398 Y_RNA.389-201ENST00000383924 113 ntBASIC0.15□□□□□ -2.39
RORAP35398 Y_RNA.509-201ENST00000384506 99 ntBASIC0.15□□□□□ -2.39
RORAP35398 MT-TD-201ENST00000387419 68 ntBASIC0.15□□□□□ -2.39
RORAP35398 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
RORAP35398 RNU7-45P-201ENST00000459460 63 ntBASIC0.15□□□□□ -2.39
RORAP35398 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
RORAP35398 AC133485.4-201ENST00000561835 220 ntBASIC0.15□□□□□ -2.39
RORAP35398 MIR5688-201ENST00000580619 83 ntBASIC0.15□□□□□ -2.39
RORAP35398 AP001282.2-201ENST00000616149 309 ntBASIC0.15□□□□□ -2.39
RORAP35398 UBE2WP1-201ENST00000362030 340 ntBASIC0.14□□□□□ -2.39
RORAP35398 Y_RNA.42-201ENST00000362660 108 ntBASIC0.14□□□□□ -2.39
RORAP35398 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
RORAP35398 RNU6-770P-201ENST00000363929 105 ntBASIC0.14□□□□□ -2.39
RORAP35398 Y_RNA.634-201ENST00000364811 113 ntBASIC0.14□□□□□ -2.39
RORAP35398 RNU6-597P-201ENST00000365620 102 ntBASIC0.14□□□□□ -2.39
RORAP35398 RNU6-101P-201ENST00000410323 104 ntBASIC0.14□□□□□ -2.39
RORAP35398 AL731563.1-201ENST00000442202 214 ntBASIC0.14□□□□□ -2.39
RORAP35398 MTND4LP30-201ENST00000454092 297 ntBASIC0.14□□□□□ -2.39
RORAP35398 RNU6-504P-201ENST00000516568 104 ntBASIC0.14□□□□□ -2.39
RORAP35398 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.14□□□□□ -2.39
RORAP35398 MIR6717-201ENST00000622747 73 ntBASIC0.14□□□□□ -2.39
RORAP35398 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
RORAP35398 Y_RNA.7-201ENST00000362352 102 ntBASIC0.13□□□□□ -2.39
RORAP35398 Y_RNA.19-201ENST00000362462 99 ntBASIC0.13□□□□□ -2.39
RORAP35398 RNU6-211P-201ENST00000384047 107 ntBASIC0.13□□□□□ -2.39
RORAP35398 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
RORAP35398 RNU6-514P-201ENST00000384208 107 ntBASIC0.13□□□□□ -2.39
RORAP35398 MIR626-201ENST00000385032 94 ntBASIC0.13□□□□□ -2.39
RORAP35398 SNORA53-201ENST00000391141 249 ntBASIC0.13□□□□□ -2.39
RORAP35398 Y_RNA.617-201ENST00000410920 90 ntBASIC0.13□□□□□ -2.39
RORAP35398 RNU6-126P-201ENST00000516685 103 ntBASIC0.13□□□□□ -2.39
RORAP35398 AC006006.1-201ENST00000603082 144 ntBASIC0.13□□□□□ -2.39
RORAP35398 AC097639.2-201ENST00000603159 172 ntBASIC0.13□□□□□ -2.39
RORAP35398 Y_RNA.85-201ENST00000363014 111 ntBASIC0.12□□□□□ -2.39
RORAP35398 Y_RNA.276-201ENST00000364732 109 ntBASIC0.12□□□□□ -2.39
RORAP35398 RNA5SP117-201ENST00000365294 118 ntBASIC0.12□□□□□ -2.39
RORAP35398 Y_RNA.410-201ENST00000383992 113 ntBASIC0.12□□□□□ -2.39
RORAP35398 SNORA1-201ENST00000384107 130 ntBASIC0.12□□□□□ -2.39
RORAP35398 Y_RNA.567-201ENST00000384736 106 ntBASIC0.12□□□□□ -2.39
RORAP35398 MT-TT-201ENST00000387460 66 ntBASIC0.12□□□□□ -2.39
RORAP35398 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
RORAP35398 RNA5SP127-201ENST00000411051 133 ntBASIC0.12□□□□□ -2.39
RORAP35398 MTND5P22-201ENST00000458380 195 ntBASIC0.12□□□□□ -2.39
RORAP35398 SNORA40.15-201ENST00000516884 107 ntBASIC0.12□□□□□ -2.39
RORAP35398 Y_RNA.721-201ENST00000517207 102 ntBASIC0.12□□□□□ -2.39
RORAP35398 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.12□□□□□ -2.39
RORAP35398 Y_RNA.64-201ENST00000362845 102 ntBASIC0.11□□□□□ -2.39
RORAP35398 Y_RNA.152-201ENST00000363578 100 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms