Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIR4499-201ENST00000584834 69 ntBASIC-1.31□□□□□ -2.62
SDC4P31431 AC069503.3-201ENST00000618674 145 ntBASIC-1.31□□□□□ -2.62
SDC4P31431 RNU4-80P-201ENST00000363200 141 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 RNU6-801P-201ENST00000364087 105 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 SCARNA1-201ENST00000517138 166 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.32□□□□□ -2.62
SDC4P31431 MIR548H5-201ENST00000580314 60 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 MIR548AG2-201ENST00000581228 64 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 AC145423.2-201ENST00000610631 239 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 AC068137.3-201ENST00000639191 341 ntBASIC-1.32□□□□□ -2.62
SDC4P31431 SNORA22.1-201ENST00000362701 134 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 RNU6-888P-201ENST00000363010 101 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 MTND4P28-201ENST00000426217 387 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 MTND1P2-201ENST00000430604 821 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 AL160004.2-201ENST00000432935 350 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 AC098614.3-201ENST00000438957 440 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 AC093423.1-201ENST00000440817 142 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 RNU1-54P-201ENST00000517181 120 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 DISC2.1-201ENST00000612827 205 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 AC092794.2-201ENST00000620933 563 ntBASIC-1.33□□□□□ -2.62
SDC4P31431 SNORD24-201ENST00000383884 75 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 SNORA72.4-201ENST00000384174 132 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 MIR518B-201ENST00000385127 83 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RNU6-308P-201ENST00000390957 107 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RNU7-55P-201ENST00000459426 62 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 SNORD77.4-201ENST00000516158 81 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 SCARNA17-201ENST00000516183 144 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RNU7-13P-201ENST00000516413 62 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RNU6-1258P-201ENST00000516911 111 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 RN7SKP295-201ENST00000517264 153 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 AC100767.1-201ENST00000528178 123 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 MTND3P12-201ENST00000559068 328 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 MTND5P40-201ENST00000559945 246 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 MIR5704-201ENST00000584029 77 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 AC011603.4-201ENST00000611325 277 ntBASIC-1.34□□□□□ -2.62
SDC4P31431 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 SNORD114-15-201ENST00000364687 72 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 MIR519E-201ENST00000385075 84 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 MTND2P22-201ENST00000444325 1033 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 SNORA13-201ENST00000458790 133 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 AC009094.1-201ENST00000564443 426 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 AC091932.4-201ENST00000623386 200 ntBASIC-1.35□□□□□ -2.63
SDC4P31431 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 RNU6-502P-201ENST00000362419 108 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 SNORA49-201ENST00000386157 136 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 MTATP6P23-201ENST00000440153 476 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 AP000533.3-201ENST00000447704 118 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 MIR2053-201ENST00000459295 91 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 AC022137.1-201ENST00000483735 151 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 MIR2355-201ENST00000517199 87 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 AC087588.2-201ENST00000617667 426 ntBASIC-1.36□□□□□ -2.63
SDC4P31431 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 MIR635-201ENST00000384830 98 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 RNU6-332P-201ENST00000391193 108 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 SNORD115-47-201ENST00000391226 86 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 AC097635.1-201ENST00000450678 155 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 RNU6-274P-201ENST00000459566 107 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 MIR4659A-201ENST00000580269 81 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 AC099654.14-201ENST00000638599 341 ntBASIC-1.37□□□□□ -2.63
SDC4P31431 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.38□□□□□ -2.63
SDC4P31431 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.38□□□□□ -2.63
SDC4P31431 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.38□□□□□ -2.63
SDC4P31431 RNU7-74P-201ENST00000459104 62 ntBASIC-1.38□□□□□ -2.63
SDC4P31431 MIR548AX-201ENST00000580117 73 ntBASIC-1.38□□□□□ -2.63
SDC4P31431 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 RNU6-431P-201ENST00000383874 107 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 Y_RNA.410-201ENST00000383992 113 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 SNORA20-201ENST00000384662 132 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 SNORD64-201ENST00000386683 67 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 SNORD11.1-201ENST00000459482 85 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 RNU7-35P-201ENST00000517174 62 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 AC140658.3-201ENST00000567603 271 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.39□□□□□ -2.63
SDC4P31431 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 MIR8068-201ENST00000618032 68 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 AC021613.1-201ENST00000623880 111 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 MIR6086-201ENST00000638065 55 ntBASIC-1.39□□□□□ -2.63
SDC4P31431 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 RNU6-99P-201ENST00000364721 107 ntBASIC-1.4□□□□□ -2.63
SDC4P31431 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms