Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 SNORD115-41-201ENST00000363608 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-11-201ENST00000363616 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-5-201ENST00000363633 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-39-201ENST00000363694 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-4-201ENST00000363810 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-16-201ENST00000363887 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-6-201ENST00000363942 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-42-201ENST00000364273 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-15-201ENST00000364809 81 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-1-201ENST00000364961 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-26-201ENST00000365067 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-10-201ENST00000365073 81 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-43-201ENST00000365503 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-36-201ENST00000365629 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 RNU7-34P-201ENST00000459394 64 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.54□□□□□ -2.16
HOXA11P31270 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 Y_RNA.676-201ENST00000516393 96 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 SNORD115-40-201ENST00000606510 82 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 AC015726.2-201ENST00000620112 122 ntBASIC1.54□□□□□ -2.16
HOXA11P31270 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA11P31270 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HOXA11P31270 Y_RNA.353-201ENST00000365440 108 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 SNORA24-201ENST00000384096 131 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 MIR526A1-201ENST00000384897 85 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HOXA11P31270 RNU7-107P-201ENST00000459121 61 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 RNU6-772P-201ENST00000516042 105 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 RNU6-902P-201ENST00000517212 91 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.53□□□□□ -2.16
HOXA11P31270 AL121890.5-201ENST00000620848 304 ntBASIC1.53□□□□□ -2.16
HOXA11P31270 RNU6-349P-201ENST00000362402 107 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 SNORD58C-201ENST00000365223 64 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 SNORA2.2-201ENST00000365473 135 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 MIR136-201ENST00000385207 82 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 MIR653-201ENST00000385279 96 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 U8.17-201ENST00000391292 132 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 AC023790.1-201ENST00000482174 347 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 IGKV1-22-201ENST00000524313 326 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 AC108081.1-201ENST00000604358 221 ntBASIC1.52□□□□□ -2.17
HOXA11P31270 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.52□□□□□ -2.17
HOXA11P31270 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
HOXA11P31270 RNU6-215P-201ENST00000365169 102 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 RNU7-80P-201ENST00000459562 61 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 AC079140.2-201ENST00000506193 142 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 RNU6-998P-201ENST00000515894 101 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 RN7SKP19-201ENST00000516016 252 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 SNORA77B-201ENST00000578179 125 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 AL359881.1-201ENST00000602916 267 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 SNORD3E-202ENST00000627253 216 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 U6.95-201ENST00000636931 70 ntBASIC1.51□□□□□ -2.17
HOXA11P31270 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HOXA11P31270 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.51□□□□□ -2.17
HOXA11P31270 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HOXA11P31270 RNU6-235P-201ENST00000362644 107 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 SNORA1.2-201ENST00000365189 134 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 Y_RNA.454-201ENST00000384224 113 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 SNORA27-201ENST00000384323 126 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 Y_RNA.494-201ENST00000384432 111 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.5□□□□□ -2.17
HOXA11P31270 AC093850.1-201ENST00000454121 251 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 RNU7-96P-201ENST00000459535 64 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 SNORA31.4-201ENST00000516049 129 ntBASIC1.5□□□□□ -2.17
HOXA11P31270 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
HOXA11P31270 Y_RNA.525-201ENST00000384570 113 ntBASIC1.49□□□□□ -2.17
HOXA11P31270 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.49□□□□□ -2.17
HOXA11P31270 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
HOXA11P31270 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.49□□□□□ -2.17
HOXA11P31270 AC091932.4-201ENST00000623386 200 ntBASIC1.49□□□□□ -2.17
HOXA11P31270 RNY1P10-201ENST00000363268 113 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 Y_RNA.351-201ENST00000365436 96 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 RNY1P6-201ENST00000384193 109 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 RNA5SP136-201ENST00000410906 107 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 Y_RNA.630-201ENST00000411370 108 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 SNORD123-201ENST00000459473 70 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 RNU6-781P-201ENST00000516377 101 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 AC090821.2-201ENST00000523552 176 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
HOXA11P31270 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
HOXA11P31270 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
HOXA11P31270 Y_RNA.241-201ENST00000364470 117 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RNU1-133P-201ENST00000364867 167 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 SNORD1A-201ENST00000364968 72 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 Y_RNA.346-201ENST00000365385 112 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RNU6-1144P-201ENST00000384247 104 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RNU6-1065P-201ENST00000384513 106 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 Y_RNA.537-201ENST00000384626 109 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 MIR516B2-201ENST00000385190 85 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 AC004223.1-201ENST00000479840 271 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RNU6-917P-201ENST00000516294 104 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 RNA5SP61-201ENST00000516453 100 ntBASIC1.47□□□□□ -2.17
HOXA11P31270 SNORA18.7-201ENST00000516910 131 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms