Protein–RNA interactions for Protein: P28328

PEX2, Peroxisome biogenesis factor 2, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX2P28328 RNA5SP261-201ENST00000410536 106 ntBASIC1.31□□□□□ -2.2
PEX2P28328 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
PEX2P28328 AC002429.1-201ENST00000437672 148 ntBASIC1.31□□□□□ -2.2
PEX2P28328 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.31□□□□□ -2.2
PEX2P28328 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
PEX2P28328 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.31□□□□□ -2.2
PEX2P28328 AP000753.3-201ENST00000604083 169 ntBASIC1.31□□□□□ -2.2
PEX2P28328 MIR8055-201ENST00000610739 97 ntBASIC1.31□□□□□ -2.2
PEX2P28328 AL596211.1-201ENST00000569873 2277 ntBASIC1.31□□□□□ -2.2
PEX2P28328 RNA5SP432-201ENST00000362480 116 ntBASIC1.3□□□□□ -2.2
PEX2P28328 Y_RNA.52-201ENST00000362760 96 ntBASIC1.3□□□□□ -2.2
PEX2P28328 RNU1-17P-201ENST00000363022 152 ntBASIC1.3□□□□□ -2.2
PEX2P28328 RNU1-124P-201ENST00000363861 145 ntBASIC1.3□□□□□ -2.2
PEX2P28328 RNA5SP190-201ENST00000365222 118 ntBASIC1.3□□□□□ -2.2
PEX2P28328 MIR150-201ENST00000385048 84 ntBASIC1.3□□□□□ -2.2
PEX2P28328 PCNPP3-201ENST00000393579 471 ntBASIC1.3□□□□□ -2.2
PEX2P28328 MIR3658-201ENST00000636291 56 ntBASIC1.3□□□□□ -2.2
PEX2P28328 MTND5P32-201ENST00000560711 1802 ntBASIC1.3□□□□□ -2.2
PEX2P28328 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
PEX2P28328 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
PEX2P28328 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
PEX2P28328 RNU6-482P-201ENST00000391068 107 ntBASIC1.29□□□□□ -2.2
PEX2P28328 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.29□□□□□ -2.2
PEX2P28328 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.29□□□□□ -2.2
PEX2P28328 MIR4264-201ENST00000583520 66 ntBASIC1.29□□□□□ -2.2
PEX2P28328 AC104465.1-201ENST00000611365 139 ntBASIC1.29□□□□□ -2.2
PEX2P28328 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-654P-201ENST00000364373 107 ntBASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-449P-201ENST00000383914 107 ntBASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-125P-201ENST00000384505 107 ntBASIC1.28□□□□□ -2.2
PEX2P28328 SNORD38B-201ENST00000384690 67 ntBASIC1.28□□□□□ -2.2
PEX2P28328 Y_RNA.580-201ENST00000391004 95 ntBASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-588P-201ENST00000410281 105 ntBASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-394P-201ENST00000410735 107 ntBASIC1.28□□□□□ -2.2
PEX2P28328 HMGN1P33-201ENST00000432945 451 ntBASIC1.28□□□□□ -2.2
PEX2P28328 SNORD13-201ENST00000459299 104 ntBASIC1.28□□□□□ -2.2
PEX2P28328 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.28□□□□□ -2.2
PEX2P28328 SNORD38B-202ENST00000625943 69 ntBASIC1.28□□□□□ -2.2
PEX2P28328 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
PEX2P28328 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
PEX2P28328 RNU6-1190P-201ENST00000410811 104 ntBASIC1.27□□□□□ -2.21
PEX2P28328 AC090844.1-201ENST00000422019 156 ntBASIC1.27□□□□□ -2.21
PEX2P28328 RPS23P4-201ENST00000487908 423 ntBASIC1.27□□□□□ -2.21
PEX2P28328 RNU6-237P-201ENST00000515985 71 ntBASIC1.27□□□□□ -2.21
PEX2P28328 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.27□□□□□ -2.21
PEX2P28328 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
PEX2P28328 SNORD113.3-201ENST00000364630 78 ntBASIC1.26□□□□□ -2.21
PEX2P28328 SNORD116-18-201ENST00000383961 92 ntBASIC1.26□□□□□ -2.21
PEX2P28328 Y_RNA.497-201ENST00000384447 98 ntBASIC1.26□□□□□ -2.21
PEX2P28328 SNORA2B-201ENST00000384583 137 ntBASIC1.26□□□□□ -2.21
PEX2P28328 SNORA20-201ENST00000384662 132 ntBASIC1.26□□□□□ -2.21
PEX2P28328 SNORD111-201ENST00000408139 94 ntBASIC1.26□□□□□ -2.21
PEX2P28328 RPS3AP1-201ENST00000413190 320 ntBASIC1.26□□□□□ -2.21
PEX2P28328 MTATP6P21-201ENST00000440681 189 ntBASIC1.26□□□□□ -2.21
PEX2P28328 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.26□□□□□ -2.21
PEX2P28328 RNA5SP458-201ENST00000516188 119 ntBASIC1.26□□□□□ -2.21
PEX2P28328 AC112693.2-201ENST00000556538 232 ntBASIC1.26□□□□□ -2.21
PEX2P28328 AC023827.1-201ENST00000569247 97 ntBASIC1.26□□□□□ -2.21
PEX2P28328 MIR3152-201ENST00000579801 74 ntBASIC1.26□□□□□ -2.21
PEX2P28328 AC106800.4-201ENST00000614905 153 ntBASIC1.26□□□□□ -2.21
PEX2P28328 Y_RNA.778-201ENST00000620203 90 ntBASIC1.26□□□□□ -2.21
PEX2P28328 MIR6717-201ENST00000622747 73 ntBASIC1.26□□□□□ -2.21
PEX2P28328 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
PEX2P28328 Y_RNA.180-201ENST00000363867 113 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU4-11P-201ENST00000365287 132 ntBASIC1.25□□□□□ -2.21
PEX2P28328 MIR200A-201ENST00000384875 90 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-1319P-201ENST00000390855 104 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-907P-201ENST00000390924 102 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-747P-201ENST00000390928 104 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-241P-201ENST00000391148 104 ntBASIC1.25□□□□□ -2.21
PEX2P28328 SNORA26.6-201ENST00000391256 115 ntBASIC1.25□□□□□ -2.21
PEX2P28328 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
PEX2P28328 RNA5SP95-201ENST00000410319 137 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-177P-201ENST00000411257 104 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNA5SP236-201ENST00000516169 116 ntBASIC1.25□□□□□ -2.21
PEX2P28328 SNORA31.24-201ENST00000517232 57 ntBASIC1.25□□□□□ -2.21
PEX2P28328 AC036111.3-201ENST00000526389 112 ntBASIC1.25□□□□□ -2.21
PEX2P28328 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.25□□□□□ -2.21
PEX2P28328 MIR3144-201ENST00000579460 79 ntBASIC1.25□□□□□ -2.21
PEX2P28328 MIR4781-201ENST00000585250 76 ntBASIC1.25□□□□□ -2.21
PEX2P28328 RNU6-151P-201ENST00000364158 107 ntBASIC1.24□□□□□ -2.21
PEX2P28328 Y_RNA.354-201ENST00000365448 111 ntBASIC1.24□□□□□ -2.21
PEX2P28328 Y_RNA.584-201ENST00000391090 114 ntBASIC1.24□□□□□ -2.21
PEX2P28328 RNU6-602P-201ENST00000411155 105 ntBASIC1.24□□□□□ -2.21
PEX2P28328 RNU7-45P-201ENST00000459460 63 ntBASIC1.24□□□□□ -2.21
PEX2P28328 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
PEX2P28328 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
PEX2P28328 AC021613.1-201ENST00000623880 111 ntBASIC1.24□□□□□ -2.21
PEX2P28328 RNU6-60P-201ENST00000364792 103 ntBASIC1.23□□□□□ -2.21
PEX2P28328 RNU6-1130P-201ENST00000365434 107 ntBASIC1.23□□□□□ -2.21
PEX2P28328 Y_RNA.430-201ENST00000384081 110 ntBASIC1.23□□□□□ -2.21
PEX2P28328 RNY1P6-201ENST00000384193 109 ntBASIC1.23□□□□□ -2.21
PEX2P28328 RNU6-804P-201ENST00000384286 107 ntBASIC1.23□□□□□ -2.21
PEX2P28328 RNU6-205P-201ENST00000390858 107 ntBASIC1.23□□□□□ -2.21
PEX2P28328 Y_RNA.8-201ENST00000362353 102 ntBASIC1.22□□□□□ -2.21
PEX2P28328 SNORD18B-201ENST00000365659 72 ntBASIC1.22□□□□□ -2.21
PEX2P28328 AC244023.1-201ENST00000426884 112 ntBASIC1.22□□□□□ -2.21
PEX2P28328 AC242498.1-201ENST00000604134 111 ntBASIC1.22□□□□□ -2.21
PEX2P28328 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PEX2P28328 SNORD114-24-201ENST00000365029 72 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms