Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.19□□□□□ -2.06
ERCC3P19447 RPS27P16-201ENST00000425758 201 ntBASIC2.19□□□□□ -2.06
ERCC3P19447 AL606753.1-201ENST00000427435 87 ntBASIC2.19□□□□□ -2.06
ERCC3P19447 RNU6-1234P-201ENST00000516877 103 ntBASIC2.19□□□□□ -2.06
ERCC3P19447 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
ERCC3P19447 RNU6-913P-201ENST00000390913 95 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 Y_RNA.651-201ENST00000459380 103 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 RNU6-1061P-201ENST00000516530 99 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.18□□□□□ -2.06
ERCC3P19447 AC133485.4-201ENST00000561835 220 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.18□□□□□ -2.06
ERCC3P19447 AC138907.4-201ENST00000570107 226 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.18□□□□□ -2.06
ERCC3P19447 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ERCC3P19447 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
ERCC3P19447 AC009474.2-201ENST00000451383 136 ntBASIC2.17□□□□□ -2.06
ERCC3P19447 MIR3152-201ENST00000579801 74 ntBASIC2.17□□□□□ -2.06
ERCC3P19447 RNU6-647P-201ENST00000364243 107 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 SNORA1.1-201ENST00000364671 133 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 SNORA24-201ENST00000384096 131 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 MIR9-3-201ENST00000385084 90 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 HMGN1P33-201ENST00000432945 451 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 AC245517.4-201ENST00000448601 281 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 RNU7-73P-201ENST00000458743 63 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 MIR548AO-201ENST00000579992 96 ntBASIC2.16□□□□□ -2.06
ERCC3P19447 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.16□□□□□ -2.06
ERCC3P19447 Y_RNA.366-201ENST00000365540 102 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 RNU6-959P-201ENST00000384671 107 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 RNA5SP261-201ENST00000410536 106 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 RNU6-1190P-201ENST00000410811 104 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 RNU6-113P-201ENST00000516653 101 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 DNAJC19P9-201ENST00000555084 351 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 CYP3A52P-201ENST00000563326 91 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 MIR3122-201ENST00000577243 73 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
ERCC3P19447 AC108081.1-201ENST00000604358 221 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 AC021443.1-201ENST00000604478 211 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 U2.22-201ENST00000636441 106 ntBASIC2.15□□□□□ -2.07
ERCC3P19447 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
ERCC3P19447 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ERCC3P19447 AL157777.2-201ENST00000258070 137 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 Y_RNA.4-201ENST00000362333 112 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 RNA5SP190-201ENST00000365222 118 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 SNORD13-201ENST00000459299 104 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 RNU6-902P-201ENST00000517212 91 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 MIR4498-201ENST00000577599 66 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 MIR3683-201ENST00000580847 82 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 AL137067.1-201ENST00000615933 120 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 AC084768.2-201ENST00000622736 221 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 AC021613.1-201ENST00000623880 111 ntBASIC2.14□□□□□ -2.07
ERCC3P19447 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
ERCC3P19447 RNU6-349P-201ENST00000362402 107 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 Y_RNA.164-201ENST00000363709 102 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 AL158147.1-201ENST00000443970 75 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.13□□□□□ -2.07
ERCC3P19447 RPS29P11-201ENST00000496507 171 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 SNORA25.15-201ENST00000516487 89 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 AL020996.3-201ENST00000606617 222 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 MIR8081-201ENST00000611533 95 ntBASIC2.13□□□□□ -2.07
ERCC3P19447 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.13□□□□□ -2.07
ERCC3P19447 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.12□□□□□ -2.07
ERCC3P19447 Y_RNA.71-201ENST00000362892 104 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 RNU6-81P-201ENST00000365608 104 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 MIR1263-201ENST00000408324 86 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 AL133373.1-201ENST00000497098 94 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 RNU6-970P-201ENST00000516312 107 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 RNU6-406P-201ENST00000516470 107 ntBASIC2.12□□□□□ -2.07
ERCC3P19447 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.12□□□□□ -2.07
ERCC3P19447 MIR103A2-201ENST00000362154 78 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 RNU6-1117P-201ENST00000384525 104 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 AC245047.7-201ENST00000440265 293 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 AC108729.3-201ENST00000513484 108 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 RNU6-62P-201ENST00000516526 102 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 RNU6-165P-201ENST00000517170 99 ntBASIC2.11□□□□□ -2.07
ERCC3P19447 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
ERCC3P19447 Y_RNA.218-201ENST00000364218 104 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 RNU6-80P-201ENST00000384195 107 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 AL022718.1-201ENST00000412004 84 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 RPS3AP1-201ENST00000413190 320 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 RNU7-164P-201ENST00000459221 62 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 RN7SKP19-201ENST00000516016 252 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 MIR8065-201ENST00000620577 100 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 MIR6717-201ENST00000622747 73 ntBASIC2.1□□□□□ -2.07
ERCC3P19447 RNU6-1319P-201ENST00000390855 104 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 RNU6-747P-201ENST00000390928 104 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 RNU6-241P-201ENST00000391148 104 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 RNU6-177P-201ENST00000411257 104 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 RNU7-107P-201ENST00000459121 61 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 AC048334.1-201ENST00000477975 159 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.09□□□□□ -2.07
ERCC3P19447 RNU6-1053P-201ENST00000515930 101 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 AC024614.2-201ENST00000577584 372 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 MIR4305-201ENST00000583252 102 ntBASIC2.09□□□□□ -2.07
ERCC3P19447 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.09□□□□□ -2.07
ERCC3P19447 SNORD38B-201ENST00000384690 67 ntBASIC2.08□□□□□ -2.08
ERCC3P19447 RNA5SP247-201ENST00000411181 105 ntBASIC2.08□□□□□ -2.08
ERCC3P19447 SNORA31.4-201ENST00000516049 129 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms