Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 RPS29P11-201ENST00000496507 171 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.4□□□□□ -2.19
PF4V1P10720 MIR4419B-201ENST00000577260 68 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.4□□□□□ -2.19
PF4V1P10720 MIR8081-201ENST00000611533 95 ntBASIC1.4□□□□□ -2.19
PF4V1P10720 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PF4V1P10720 SNORD116-18-201ENST00000383961 92 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 MIR19B1-201ENST00000384829 87 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 MTATP6P21-201ENST00000440681 189 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.39□□□□□ -2.19
PF4V1P10720 RNU7-40P-201ENST00000516397 64 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 AC112693.2-201ENST00000556538 232 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 MIR3618-201ENST00000580330 88 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 AC008163.1-202ENST00000636004 2889 ntBASIC1.39□□□□□ -2.19
PF4V1P10720 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PF4V1P10720 MIR377-201ENST00000362145 69 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 RNU6-151P-201ENST00000364158 107 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 RNU4-11P-201ENST00000365287 132 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 RNU6-804P-201ENST00000384286 107 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 SNORD38B-201ENST00000384690 67 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 MIR9-3-201ENST00000385084 90 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 Y_RNA.584-201ENST00000391090 114 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 AC002429.1-201ENST00000437672 148 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
PF4V1P10720 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.38□□□□□ -2.19
PF4V1P10720 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 MIR4264-201ENST00000583520 66 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 SNORD38B-202ENST00000625943 69 ntBASIC1.38□□□□□ -2.19
PF4V1P10720 RNU1-124P-201ENST00000363861 145 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 RNU6-1130P-201ENST00000365434 107 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 AC108667.1-201ENST00000428618 249 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 RNU6-1053P-201ENST00000515930 101 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 RNA5SP236-201ENST00000516169 116 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 RNA5SP404-201ENST00000517118 132 ntBASIC1.37□□□□□ -2.19
PF4V1P10720 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-125P-201ENST00000384505 107 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 SNORA20-201ENST00000384662 132 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 SNORA26.6-201ENST00000391256 115 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RPS3AP1-201ENST00000413190 320 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 HMGN1P33-201ENST00000432945 451 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 RNU6-1212P-201ENST00000517023 104 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.36□□□□□ -2.19
PF4V1P10720 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.36□□□□□ -2.19
PF4V1P10720 MIR6717-201ENST00000622747 73 ntBASIC1.36□□□□□ -2.19
PF4V1P10720 Y_RNA.8-201ENST00000362353 102 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 Y_RNA.164-201ENST00000363709 102 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 Y_RNA.354-201ENST00000365448 111 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 SNORD18B-201ENST00000365659 72 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 Y_RNA.398-201ENST00000383952 99 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 Y_RNA.430-201ENST00000384081 110 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 RNU6-1190P-201ENST00000410811 104 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 AC090844.1-201ENST00000422019 156 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 RPS23P4-201ENST00000487908 423 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 MIR3683-201ENST00000580847 82 ntBASIC1.35□□□□□ -2.19
PF4V1P10720 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
PF4V1P10720 Y_RNA.120-201ENST00000363304 110 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 Y_RNA.168-201ENST00000363740 102 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 Y_RNA.251-201ENST00000364551 99 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 SNORD113.3-201ENST00000364630 78 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 RNU6-209P-201ENST00000384118 107 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 RNY1P6-201ENST00000384193 109 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 MIR513C-201ENST00000401352 84 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 SNORD111-201ENST00000408139 94 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 MIR548I1-201ENST00000408810 149 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 AC011603.4-201ENST00000611325 277 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 AC106800.4-201ENST00000614905 153 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 AC021613.1-201ENST00000623880 111 ntBASIC1.34□□□□□ -2.19
PF4V1P10720 MIR337-201ENST00000362281 93 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 RNU6-893P-201ENST00000458841 100 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 AC036111.3-201ENST00000526389 112 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 MIR4498-201ENST00000577599 66 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 snoU13.31-201ENST00000607291 104 ntBASIC1.33□□□□□ -2.2
PF4V1P10720 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
PF4V1P10720 Y_RNA.400-201ENST00000383963 111 ntBASIC1.32□□□□□ -2.2
PF4V1P10720 SNORA2B-201ENST00000384583 137 ntBASIC1.32□□□□□ -2.2
PF4V1P10720 MIR200A-201ENST00000384875 90 ntBASIC1.32□□□□□ -2.2
PF4V1P10720 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
PF4V1P10720 RNU7-45P-201ENST00000459460 63 ntBASIC1.32□□□□□ -2.2
PF4V1P10720 Y_RNA.4-201ENST00000362333 112 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 RNU6-580P-201ENST00000365159 107 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 AC244023.1-201ENST00000426884 112 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.31□□□□□ -2.2
PF4V1P10720 RNU7-197P-201ENST00000458836 62 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.31□□□□□ -2.2
PF4V1P10720 AC242498.1-201ENST00000604134 111 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.31□□□□□ -2.2
PF4V1P10720 AC021753.1-201ENST00000635724 168 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms