| MSL3P1 | P0C860 | Y_RNA.299-201 | ENST00000364973 | 94 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | Y_RNA.370-201 | ENST00000365589 | 108 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR516B2-201 | ENST00000385190 | 85 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR660-201 | ENST00000385235 | 97 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-1319P-201 | ENST00000390855 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-747P-201 | ENST00000390928 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-241P-201 | ENST00000391148 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNA5SP501-201 | ENST00000410990 | 112 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-177P-201 | ENST00000411257 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | snoU13.27-201 | ENST00000459278 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU7-34P-201 | ENST00000459394 | 64 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6ATAC9P-201 | ENST00000516210 | 116 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RN7SKP12-201 | ENST00000516275 | 143 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU7-53P-201 | ENST00000516705 | 60 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | AC021506.2-201 | ENST00000612354 | 169 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | FAS-AS1.2-201 | ENST00000620386 | 170 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | Y_RNA.155-201 | ENST00000363632 | 101 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | SNORA24-201 | ENST00000384096 | 131 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNA5SP261-201 | ENST00000410536 | 106 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU2-13P-201 | ENST00000515909 | 113 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR1273D-201 | ENST00000577266 | 86 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR4529-201 | ENST00000578110 | 78 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR3152-201 | ENST00000579801 | 74 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | Y_RNA.171-201 | ENST00000363760 | 102 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-1134P-201 | ENST00000365156 | 101 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-1258P-201 | ENST00000516911 | 111 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR4694-201 | ENST00000578534 | 80 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | CGGBP1-202 | ENST00000398392 | 5298 nt | APPRIS P1 BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-363P-201 | ENST00000362895 | 105 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU4-67P-201 | ENST00000364569 | 141 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNA5SP37-201 | ENST00000365420 | 130 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | Y_RNA.360-201 | ENST00000365512 | 102 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-409P-201 | ENST00000384114 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR450A2-201 | ENST00000385022 | 100 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR577-201 | ENST00000385196 | 96 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | Y_RNA.601-201 | ENST00000410500 | 113 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6-733P-201 | ENST00000410759 | 104 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RPS29P29-201 | ENST00000456396 | 171 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU7-113P-201 | ENST00000459273 | 62 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | AC099513.1-201 | ENST00000490423 | 301 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | RNU6ATAC17P-201 | ENST00000516074 | 71 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | AC026421.1-201 | ENST00000519101 | 163 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| MSL3P1 | P0C860 | MIR494-201 | ENST00000349529 | 81 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORD115-2-201 | ENST00000362842 | 82 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-832P-201 | ENST00000363319 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Y_RNA.290-201 | ENST00000364879 | 114 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORD115-20-201 | ENST00000365099 | 82 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR605-201 | ENST00000385078 | 83 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RN7SKP223-201 | ENST00000410582 | 62 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU4-69P-201 | ENST00000410677 | 143 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Z98742.3-201 | ENST00000418637 | 326 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | HMGN2P19-201 | ENST00000425149 | 265 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AC093850.1-201 | ENST00000454121 | 251 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AC108752.1-201 | ENST00000484679 | 576 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU7-61P-201 | ENST00000515897 | 61 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-795P-201 | ENST00000516323 | 103 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | DNAJC19P9-201 | ENST00000555084 | 351 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | ZNRD1-AS1_3.8-201 | ENST00000611686 | 104 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR1245B-201 | ENST00000636115 | 69 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | OSTN-201 | ENST00000339051 | 402 nt | APPRIS P1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR21-201 | ENST00000362134 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Y_RNA.10-201 | ENST00000362371 | 110 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | U8.2-201 | ENST00000363156 | 134 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-573P-201 | ENST00000383938 | 106 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Y_RNA.470-201 | ENST00000384307 | 117 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-1067P-201 | ENST00000384752 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-592P-201 | ENST00000411333 | 103 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AL353813.1-201 | ENST00000440700 | 253 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU7-67P-201 | ENST00000459003 | 62 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORD123-201 | ENST00000459473 | 70 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-958P-201 | ENST00000516995 | 106 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AP003327.1-201 | ENST00000529684 | 127 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AC012531.4-201 | ENST00000616509 | 177 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORD3E-202 | ENST00000627253 | 216 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR6841-201 | ENST00000637129 | 72 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | GS1-279B7.1-204 | ENST00000641809 | 378 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORA22.1-201 | ENST00000362701 | 134 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Y_RNA.430-201 | ENST00000384081 | 110 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-820P-201 | ENST00000384273 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-1190P-201 | ENST00000410811 | 104 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RPL23AP42-201 | ENST00000471152 | 471 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR548AE2-201 | ENST00000583456 | 67 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | AC007370.2-201 | ENST00000506899 | 2694 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | KIF20B-202 | ENST00000371728 | 6419 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | FSIP2-206 | ENST00000611759 | 3882 nt | APPRIS ALT2 TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-170P-201 | ENST00000362832 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | Y_RNA.537-201 | ENST00000384626 | 109 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | MIR526A1-201 | ENST00000384897 | 85 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-360P-201 | ENST00000390944 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-679P-201 | ENST00000391003 | 106 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6-644P-201 | ENST00000391155 | 98 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | SNORA26.6-201 | ENST00000391256 | 115 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| MSL3P1 | P0C860 | RNU6ATAC37P-201 | ENST00000408328 | 131 nt | BASIC | 2.18 | □□□□□ -2.06 | | |