Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 MIR8054-201ENST00000620877 86 ntBASIC2.41□□□□□ -2.02
TMEM253P0C7T8 AL512310.12-203ENST00000640543 90 ntBASIC2.41□□□□□ -2.02
TMEM253P0C7T8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TMEM253P0C7T8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TMEM253P0C7T8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
TMEM253P0C7T8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TMEM253P0C7T8 SNORD115-27-201ENST00000364430 82 ntBASIC2.4□□□□□ -2.03
TMEM253P0C7T8 RNU6-163P-201ENST00000384396 106 ntBASIC2.4□□□□□ -2.03
TMEM253P0C7T8 MIR597-201ENST00000384968 97 ntBASIC2.4□□□□□ -2.03
TMEM253P0C7T8 SNORA48.1-201ENST00000390879 135 ntBASIC2.4□□□□□ -2.03
TMEM253P0C7T8 STAG3L5P-204ENST00000443759 179 ntBASIC2.4□□□□□ -2.03
TMEM253P0C7T8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.4□□□□□ -2.03
TMEM253P0C7T8 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TMEM253P0C7T8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TMEM253P0C7T8 AC245060.5-201ENST00000610778 3293 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 RNU6-633P-201ENST00000362612 103 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 SNORA22.1-201ENST00000362701 134 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.316-201ENST00000365118 111 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 SNORA32-201ENST00000384072 121 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.39□□□□□ -2.03
TMEM253P0C7T8 RNU7-34P-201ENST00000459394 64 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 AC108729.3-201ENST00000513484 108 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 RNU7-28P-201ENST00000516759 62 ntBASIC2.39□□□□□ -2.03
TMEM253P0C7T8 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
TMEM253P0C7T8 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TMEM253P0C7T8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TMEM253P0C7T8 SNORD116-10-201ENST00000363791 102 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 MIR1267-201ENST00000408723 78 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 HMGN2P35-201ENST00000412164 270 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.38□□□□□ -2.03
TMEM253P0C7T8 AC073261.1-201ENST00000429409 121 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 HMGN2P3-201ENST00000433603 273 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 HMGN2P5-201ENST00000436882 273 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 IGLV3-17-201ENST00000519099 244 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.38□□□□□ -2.03
TMEM253P0C7T8 AC020891.4-201ENST00000605745 93 ntBASIC2.38□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.96-201ENST00000363092 109 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.430-201ENST00000384081 110 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 RNU6-913P-201ENST00000390913 95 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 U8.16-201ENST00000391279 133 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.609-201ENST00000410669 89 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 UBL5P3-201ENST00000475112 231 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 RNU6-958P-201ENST00000516995 106 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 MIR4529-201ENST00000578110 78 ntBASIC2.37□□□□□ -2.03
TMEM253P0C7T8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.37□□□□□ -2.03
TMEM253P0C7T8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
TMEM253P0C7T8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
TMEM253P0C7T8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
TMEM253P0C7T8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
TMEM253P0C7T8 SNORA5B-201ENST00000363786 132 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 SNORA1.1-201ENST00000364671 133 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 RNU6-524P-201ENST00000384270 107 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 RNU6-950P-201ENST00000384651 107 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 RNU6-613P-201ENST00000410412 108 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 Y_RNA.607-201ENST00000410597 98 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 HSPE1P9-201ENST00000440046 311 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 SNORA31.25-201ENST00000517242 134 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 MIR5094-201ENST00000578766 85 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 MIR4439-201ENST00000583746 80 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 U1.36-201ENST00000620684 176 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 MIR6717-201ENST00000622747 73 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 AC027279.3-201ENST00000625055 122 ntBASIC2.36□□□□□ -2.03
TMEM253P0C7T8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.35□□□□□ -2.03
TMEM253P0C7T8 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 RNU6-1229P-201ENST00000364295 107 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 MIR516B2-201ENST00000385190 85 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 RNU6-788P-201ENST00000390967 104 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 SNORD77B-201ENST00000391112 67 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 SNORA11.1-201ENST00000408133 129 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 MIR4791-201ENST00000607666 84 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
TMEM253P0C7T8 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TMEM253P0C7T8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
TMEM253P0C7T8 SNORA67.4-201ENST00000384688 142 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 MIR483-201ENST00000385070 76 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 SNORD28B-201ENST00000390993 75 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 SUB1P4-201ENST00000566062 339 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 AC096720.1-201ENST00000604441 183 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 SNORA28-201ENST00000606769 126 ntBASIC2.34□□□□□ -2.03
TMEM253P0C7T8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TMEM253P0C7T8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.34□□□□□ -2.04
TMEM253P0C7T8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TMEM253P0C7T8 Y_RNA.370-201ENST00000365589 108 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 RNU6-342P-201ENST00000384521 104 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 MIR34C-201ENST00000384831 77 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 MIR520A-201ENST00000384862 85 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 SNORA48.3-201ENST00000391081 134 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 RPL23AP83-201ENST00000434984 473 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 RNA5SP200-201ENST00000516360 103 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 RNA5SP168-201ENST00000516642 112 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 MIR3152-201ENST00000579801 74 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
TMEM253P0C7T8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TMEM253P0C7T8 SNORA24-201ENST00000384096 131 ntBASIC2.32□□□□□ -2.04
TMEM253P0C7T8 RNA5SP501-201ENST00000410990 112 ntBASIC2.32□□□□□ -2.04
TMEM253P0C7T8 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
TMEM253P0C7T8 HMGN1P33-201ENST00000432945 451 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms