Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR608-201ENST00000384820 100 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 AL035398.1-201ENST00000430869 322 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.668-201ENST00000516233 93 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
RAB40ALP0C0E4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.65-201ENST00000362846 100 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.350-201ENST00000365409 98 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 RNU6-913P-201ENST00000390913 95 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 AL138752.1-201ENST00000452964 351 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 RNU7-96P-201ENST00000459535 64 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 RNU6-561P-201ENST00000516222 102 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 AC025627.3-201ENST00000582078 182 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 AC108706.1-201ENST00000611053 297 ntBASIC0.8□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.7-201ENST00000362352 102 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.23-201ENST00000362496 106 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 SNORA1-201ENST00000384107 130 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 AC090844.1-201ENST00000422019 156 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 RNU2-11P-201ENST00000459191 187 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 RNY3P16-201ENST00000516338 101 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 MIR4744-201ENST00000581563 82 ntBASIC0.79□□□□□ -2.28
RAB40ALP0C0E4 MIR1-1-201ENST00000362147 71 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 MIR342-201ENST00000362212 99 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.20-201ENST00000362479 113 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 SNORA1.1-201ENST00000364671 133 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 Y_RNA.440-201ENST00000384120 114 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 SNORD38B-201ENST00000384690 67 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 MIR613-201ENST00000385248 95 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 RNU6-493P-201ENST00000391321 108 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 MIR1827-201ENST00000408549 66 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 MTND3P2-201ENST00000438452 342 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 AL121914.1-201ENST00000450188 156 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 RNU6-998P-201ENST00000515894 101 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 MIR3129-201ENST00000581095 76 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 AL353765.1-201ENST00000605514 183 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 AC062037.2-201ENST00000610137 73 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 U4.1-201ENST00000620349 87 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 SNORD38B-202ENST00000625943 69 ntBASIC0.78□□□□□ -2.28
RAB40ALP0C0E4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 RNU6-580P-201ENST00000365159 107 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 RNY4P28-201ENST00000365281 93 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR598-201ENST00000384868 97 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 SNORD77.3-201ENST00000391113 65 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR548I3-201ENST00000408378 149 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 RNU4-43P-201ENST00000410628 137 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 HMGN1P33-201ENST00000432945 451 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 RNU7-62P-201ENST00000458856 62 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR4653-201ENST00000585107 83 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR8055-201ENST00000610739 97 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 Z97988.1-201ENST00000637697 135 ntBASIC0.77□□□□□ -2.29
RAB40ALP0C0E4 MIR302B-201ENST00000362188 73 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 RNU6-196P-201ENST00000384315 107 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.478-201ENST00000384358 107 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.542-201ENST00000384641 111 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 SNORD99-201ENST00000408612 74 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 AC244023.1-201ENST00000426884 112 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 AC113410.1-201ENST00000505029 247 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 MTND1P19-201ENST00000511780 315 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 MIR3128-201ENST00000581957 66 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 AC242498.1-201ENST00000604134 111 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 RNU2-4P-201ENST00000606190 192 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 AC099654.10-201ENST00000640395 161 ntBASIC0.76□□□□□ -2.29
RAB40ALP0C0E4 RNU6-923P-201ENST00000364753 107 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 RNU6-702P-201ENST00000364982 107 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 RNU6-934P-201ENST00000365154 107 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.466-201ENST00000384294 113 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.539-201ENST00000384635 107 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.626-201ENST00000411288 95 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 SNORD83.1-201ENST00000411362 77 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 snoU13.21-201ENST00000459368 105 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.797-201ENST00000515977 94 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 AC023934.1-201ENST00000574529 2389 ntBASIC0.75□□□□□ -2.29
RAB40ALP0C0E4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 RNU1-133P-201ENST00000364867 167 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 Y_RNA.351-201ENST00000365436 96 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 SNORD105-201ENST00000386910 85 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 SNORD116-25-201ENST00000516517 92 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 MIR5197-201ENST00000583721 112 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 AC104465.1-201ENST00000611365 139 ntBASIC0.74□□□□□ -2.29
RAB40ALP0C0E4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms