Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD115-34-201ENST00000362441 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-12-201ENST00000362583 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-29-201ENST00000362834 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-9-201ENST00000362912 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-21-201ENST00000362963 81 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-14-201ENST00000363090 81 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-13-201ENST00000363358 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-41-201ENST00000363608 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-11-201ENST00000363616 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-5-201ENST00000363633 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-39-201ENST00000363694 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-4-201ENST00000363810 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-16-201ENST00000363887 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-6-201ENST00000363942 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 RNU6-647P-201ENST00000364243 107 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-42-201ENST00000364273 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-15-201ENST00000364809 81 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 RNU6-392P-201ENST00000364926 101 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-1-201ENST00000364961 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-26-201ENST00000365067 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-10-201ENST00000365073 81 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-43-201ENST00000365503 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-36-201ENST00000365629 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 RNU6-735P-201ENST00000410612 107 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 RNU6-781P-201ENST00000516377 101 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 MIR548AR-201ENST00000582191 57 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 AL359881.1-201ENST00000602916 267 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 SNORD115-40-201ENST00000606510 82 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 AC103810.8-201ENST00000607347 118 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 MIR8070-201ENST00000616510 88 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 AC091932.4-201ENST00000623386 200 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 AL596211.1-201ENST00000569873 2277 ntBASIC1.85□□□□□ -2.11
SNRPA1P09661 RNU1-133P-201ENST00000364867 167 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 RNA5SP259-201ENST00000365541 109 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 Y_RNA.370-201ENST00000365589 108 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 MIR570-201ENST00000384917 97 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 MIR513A1-201ENST00000385138 129 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 Y_RNA.630-201ENST00000411370 108 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 RNU6-240P-201ENST00000516098 97 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 IGKV1-22-201ENST00000524313 326 ntBASIC1.84□□□□□ -2.11
SNRPA1P09661 WWP1P1-201ENST00000466609 2769 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 Y_RNA.366-201ENST00000365540 102 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SNRPA1P09661 RNU7-80P-201ENST00000459562 61 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 RPS29P24-201ENST00000486345 171 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.83□□□□□ -2.12
SNRPA1P09661 RN7SKP19-201ENST00000516016 252 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 RN7SKP179-201ENST00000516126 217 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 HSPE1P19-201ENST00000603327 295 ntBASIC1.83□□□□□ -2.12
SNRPA1P09661 SNORA1.2-201ENST00000365189 134 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 SNORD58C-201ENST00000365223 64 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 Y_RNA.617-201ENST00000410920 90 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 RNU6-998P-201ENST00000515894 101 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 Y_RNA.712-201ENST00000517011 92 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.82□□□□□ -2.12
SNRPA1P09661 RNU6-349P-201ENST00000362402 107 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 RNU4-16P-201ENST00000364737 141 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 RNU6-690P-201ENST00000365242 106 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 AC107297.1-201ENST00000459991 176 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 AC023790.1-201ENST00000482174 347 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 SNORA31.4-201ENST00000516049 129 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 RNU6-113P-201ENST00000516653 101 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 SNORA74.3-201ENST00000517108 154 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
SNRPA1P09661 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.81□□□□□ -2.12
SNRPA1P09661 AP000648.3-201ENST00000623539 4507 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.8□□□□□ -2.12
SNRPA1P09661 RNY1P6-201ENST00000384193 109 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 Y_RNA.454-201ENST00000384224 113 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR1263-201ENST00000408324 86 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR1287-201ENST00000408492 90 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 RNU2-11P-201ENST00000459191 187 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 RNU7-96P-201ENST00000459535 64 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 RNU6-958P-201ENST00000516995 106 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 AL137067.1-201ENST00000615933 120 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 AL353770.2-201ENST00000620024 78 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR3914-2-201ENST00000637339 95 ntBASIC1.8□□□□□ -2.12
SNRPA1P09661 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SNRPA1P09661 MIR320A-201ENST00000385302 82 ntBASIC1.79□□□□□ -2.12
SNRPA1P09661 AL035398.1-201ENST00000430869 322 ntBASIC1.79□□□□□ -2.12
SNRPA1P09661 RNU7-67P-201ENST00000459003 62 ntBASIC1.79□□□□□ -2.12
SNRPA1P09661 AC005908.1-201ENST00000468701 347 ntBASIC1.79□□□□□ -2.12
SNRPA1P09661 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SNRPA1P09661 MIR302B-201ENST00000362188 73 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 RNA5SP363-201ENST00000365072 115 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 MIR653-201ENST00000385279 96 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 RNU7-45P-201ENST00000459460 63 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 RNU2-13P-201ENST00000515909 113 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 SNORD33.1-201ENST00000516213 88 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 RNU6-922P-201ENST00000516753 99 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 MIR4791-201ENST00000607666 84 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 AC243994.1-201ENST00000618627 109 ntBASIC1.78□□□□□ -2.12
SNRPA1P09661 Y_RNA.563-201ENST00000384707 108 ntBASIC1.77□□□□□ -2.13
SNRPA1P09661 Y_RNA.629-201ENST00000411368 105 ntBASIC1.77□□□□□ -2.13
SNRPA1P09661 RPS29P29-201ENST00000456396 171 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms