Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.48□□□□□ -2.33
SFTPBP07988 RNU6-1299P-201ENST00000516316 100 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 RNU6-504P-201ENST00000516568 104 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 Y_RNA.7-201ENST00000362352 102 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 Y_RNA.44-201ENST00000362676 108 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNA5SP457-201ENST00000363657 124 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 SNORA63C-201ENST00000364578 129 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNU6-484P-201ENST00000384016 107 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 MIR588-201ENST00000384900 83 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNU2-70P-201ENST00000410718 179 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNU6-651P-201ENST00000411040 105 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 RNU6-602P-201ENST00000411155 105 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 AL157398.1-201ENST00000452981 186 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 MIR4711-201ENST00000578274 70 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 MIR3612-201ENST00000579753 87 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 Z83818.1-201ENST00000603584 150 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.47□□□□□ -2.33
SFTPBP07988 MIR342-201ENST00000362212 99 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 MIR18A-201ENST00000362310 71 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU6-740P-201ENST00000364734 105 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 Y_RNA.634-201ENST00000364811 113 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU6-639P-201ENST00000384074 107 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 Y_RNA.512-201ENST00000384518 102 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU6-1165P-201ENST00000410119 107 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU2-11P-201ENST00000459191 187 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 TRBVB-201ENST00000477100 408 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 Y_RNA.701-201ENST00000516812 110 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 AP001282.2-201ENST00000616149 309 ntBASIC0.46□□□□□ -2.34
SFTPBP07988 Y_RNA.85-201ENST00000363014 111 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 Y_RNA.115-201ENST00000363272 98 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 Y_RNA.237-201ENST00000364439 102 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 Y_RNA.374-201ENST00000365606 101 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 SNORA26-201ENST00000391286 122 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 MIR938-201ENST00000401216 83 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 MIR548I3-201ENST00000408378 149 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 Y_RNA.604-201ENST00000410574 102 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 MTCYBP6-201ENST00000441810 138 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 RNU7-96P-201ENST00000459535 64 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 RNU6-1153P-201ENST00000516760 105 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 RNU6-453P-201ENST00000516819 85 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
SFTPBP07988 snoU2_19.4-201ENST00000364329 80 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
SFTPBP07988 Y_RNA.432-201ENST00000384087 111 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 RNU6-1228P-201ENST00000391014 107 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 AC092628.1-201ENST00000436250 252 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 SNRPGP8-201ENST00000454064 226 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 MIR18B-201ENST00000454574 71 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 snoU13.2-201ENST00000459201 104 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 RNU6-998P-201ENST00000515894 101 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.44□□□□□ -2.34
SFTPBP07988 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.44□□□□□ -2.34
SFTPBP07988 MIR8087-201ENST00000612745 78 ntBASIC0.44□□□□□ -2.34
SFTPBP07988 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.43□□□□□ -2.34
SFTPBP07988 Y_RNA.304-201ENST00000365011 112 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 RNU6-716P-201ENST00000365621 103 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 RNU6-1189P-201ENST00000383958 107 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 Y_RNA.440-201ENST00000384120 114 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 RNU6-713P-201ENST00000384761 107 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 SNORD12C-201ENST00000386307 89 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 SNORD77.3-201ENST00000391113 65 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 RNU6-1109P-201ENST00000391187 107 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 AL606845.1-201ENST00000404881 255 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 RNU2-55P-201ENST00000411146 174 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 AC008608.1-201ENST00000603910 127 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.43□□□□□ -2.34
SFTPBP07988 Y_RNA.30-201ENST00000362572 97 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 Y_RNA.199-201ENST00000364014 102 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 Y_RNA.410-201ENST00000383992 113 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 SNORA1-201ENST00000384107 130 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 RNU6-364P-201ENST00000384387 107 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 MIR1257-201ENST00000408490 117 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 SNORD2.1-201ENST00000458762 69 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 RNU7-185P-201ENST00000459215 60 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 SNORA68.3-201ENST00000515906 83 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 RN7SKP12-201ENST00000516275 143 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 AC243829.6-201ENST00000612652 106 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 U2.14-201ENST00000615943 113 ntBASIC0.42□□□□□ -2.34
SFTPBP07988 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
SFTPBP07988 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
SFTPBP07988 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 MIR125B2-201ENST00000385128 89 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 Y_RNA.590-201ENST00000410140 107 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 RNA5SP193-201ENST00000410353 107 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 RNU7-102P-201ENST00000458948 62 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 RNU7-45P-201ENST00000459460 63 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 RNA5SP153-201ENST00000516498 76 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 RNA5SP330-201ENST00000517096 96 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 AC044792.1-201ENST00000593294 196 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.41□□□□□ -2.34
SFTPBP07988 Y_RNA.23-201ENST00000362496 106 ntBASIC0.4□□□□□ -2.35
SFTPBP07988 Y_RNA.82-201ENST00000363000 102 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms