Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MIR215-201ENST00000384858 110 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 MIR548I3-201ENST00000408378 149 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 MIR1252-201ENST00000408861 65 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 MTND4LP30-201ENST00000454092 297 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 Y_RNA.641-201ENST00000459414 105 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 Y_RNA.631-201ENST00000459607 101 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 AC100767.1-201ENST00000528178 123 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 Y_RNA.804-201ENST00000615262 101 ntBASIC0.18□□□□□ -2.38
CAPN1P07384 Y_RNA.66-201ENST00000362862 102 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 RNU6-326P-201ENST00000365480 107 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 Y_RNA.380-201ENST00000365663 111 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 RNU6-514P-201ENST00000384208 107 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 Y_RNA.572-201ENST00000384757 98 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 MT-TF-201ENST00000387314 71 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 AF228730.3-201ENST00000436691 102 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 RNU7-96P-201ENST00000459535 64 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 RNU6-998P-201ENST00000515894 101 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 RNU6-365P-201ENST00000517113 106 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 Y_RNA.802-201ENST00000614892 130 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 snoU18.1-201ENST00000629629 71 ntBASIC0.17□□□□□ -2.38
CAPN1P07384 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNA5SP117-201ENST00000365294 118 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 SNORA8.2-201ENST00000384372 139 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 MT-TD-201ENST00000387419 68 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 SNORA53-201ENST00000391141 249 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNU6-101P-201ENST00000410323 104 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RPL21P38-201ENST00000418090 167 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNU2-11P-201ENST00000459191 187 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNU6-126P-201ENST00000516685 103 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 AP003733.2-201ENST00000529409 171 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 MIR3678-201ENST00000578455 94 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 MIR4801-201ENST00000582704 82 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 AC078938.1-201ENST00000620993 318 ntBASIC0.16□□□□□ -2.38
CAPN1P07384 RNA5SP62-201ENST00000363457 110 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 Y_RNA.229-201ENST00000364347 113 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 Y_RNA.389-201ENST00000383924 113 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 SNORD77.3-201ENST00000391113 65 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 ELOCP20-201ENST00000422460 345 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.15□□□□□ -2.39
CAPN1P07384 SNORA27.4-201ENST00000516650 95 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 AC131281.1-201ENST00000522984 164 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.15□□□□□ -2.39
CAPN1P07384 MIR5688-201ENST00000580619 83 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 AC037487.3-201ENST00000606668 112 ntBASIC0.15□□□□□ -2.39
CAPN1P07384 Y_RNA.7-201ENST00000362352 102 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 Y_RNA.24-201ENST00000362508 103 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 Y_RNA.85-201ENST00000363014 111 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 Y_RNA.91-201ENST00000363042 107 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 RNU6-1099P-201ENST00000363533 107 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 RNU6-806P-201ENST00000365147 105 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 Y_RNA.440-201ENST00000384120 114 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 RNA5SP127-201ENST00000411051 133 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 RNU6-504P-201ENST00000516568 104 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 SNORA40.15-201ENST00000516884 107 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 Y_RNA.721-201ENST00000517207 102 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 AC133485.4-201ENST00000561835 220 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 AC006006.1-201ENST00000603082 144 ntBASIC0.14□□□□□ -2.39
CAPN1P07384 UBE2WP1-201ENST00000362030 340 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 Y_RNA.16-201ENST00000362421 102 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 Y_RNA.26-201ENST00000362539 101 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 Y_RNA.28-201ENST00000362554 111 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 SNORA36.1-201ENST00000363424 132 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 Y_RNA.214-201ENST00000364201 112 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 RNU6-484P-201ENST00000384016 107 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 Y_RNA.567-201ENST00000384736 106 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 SNORA26.6-201ENST00000391256 115 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 AL731563.1-201ENST00000442202 214 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 RNU7-45P-201ENST00000459460 63 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.13□□□□□ -2.39
CAPN1P07384 MIR8066-201ENST00000617280 78 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.13□□□□□ -2.39
CAPN1P07384 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.13□□□□□ -2.39
CAPN1P07384 MIR342-201ENST00000362212 99 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 Y_RNA.42-201ENST00000362660 108 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNA5SP257-201ENST00000363023 116 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNU6-770P-201ENST00000363929 105 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNU6-740P-201ENST00000364734 105 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 Y_RNA.634-201ENST00000364811 113 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 Y_RNA.374-201ENST00000365606 101 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNU6-1189P-201ENST00000383958 107 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNU6-815P-201ENST00000384080 113 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 Y_RNA.431-201ENST00000384086 102 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 SNORA8.3-201ENST00000384679 139 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.12□□□□□ -2.39
CAPN1P07384 RNU6-863P-201ENST00000515989 104 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 AP001282.2-201ENST00000616149 309 ntBASIC0.12□□□□□ -2.39
CAPN1P07384 Y_RNA.19-201ENST00000362462 99 ntBASIC0.11□□□□□ -2.39
CAPN1P07384 Y_RNA.276-201ENST00000364732 109 ntBASIC0.11□□□□□ -2.39
CAPN1P07384 RNU6-597P-201ENST00000365620 102 ntBASIC0.11□□□□□ -2.39
CAPN1P07384 Y_RNA.410-201ENST00000383992 113 ntBASIC0.11□□□□□ -2.39
CAPN1P07384 RNU6-211P-201ENST00000384047 107 ntBASIC0.11□□□□□ -2.39
CAPN1P07384 RNU6-474P-201ENST00000384243 107 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms