Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 MIR181B2-201ENST00000385004 89 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 SNORD115-47-201ENST00000391226 86 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 AC024067.1-201ENST00000426199 223 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 AF228730.3-201ENST00000436691 102 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 RNU6-86P-201ENST00000606534 107 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 MIR6738-201ENST00000619620 64 ntBASIC-1.13□□□□□ -2.59
TCRBP04435 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 SNORD83B-201ENST00000386745 93 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 RNU6-881P-201ENST00000516813 102 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 RNU6-175P-201ENST00000516896 107 ntBASIC-1.14□□□□□ -2.59
TCRBP04435 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.14□□□□□ -2.59
TCRBP04435 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.14□□□□□ -2.59
TCRBP04435 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.14□□□□□ -2.59
TCRBP04435 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 SNORA72.4-201ENST00000384174 132 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 RNU6-780P-201ENST00000391030 104 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 SNORD78.2-201ENST00000391076 69 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 RNU6-383P-201ENST00000410864 94 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.15□□□□□ -2.59
TCRBP04435 SPINT5P-201ENST00000448174 155 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 RNU6-864P-201ENST00000516256 108 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 SNORD38.3-201ENST00000516599 73 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 AL512360.1-201ENST00000555346 234 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 MIR4659A-201ENST00000580269 81 ntBASIC-1.15□□□□□ -2.59
TCRBP04435 SNORD81.1-201ENST00000363064 77 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-99P-201ENST00000364721 107 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 MIR539-201ENST00000365690 78 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-308P-201ENST00000390957 107 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 SNORD57-201ENST00000448188 72 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 MTND3P3-201ENST00000505004 126 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 RNU6-566P-201ENST00000516790 107 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.16□□□□□ -2.6
TCRBP04435 AL021707.8-201ENST00000609428 183 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 uc_338.10-201ENST00000621872 182 ntBASIC-1.16□□□□□ -2.6
TCRBP04435 SNORA22.1-201ENST00000362701 134 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 SNORD114-29-201ENST00000364819 70 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 RNY1P2-201ENST00000364820 117 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 SNORD24-201ENST00000383884 75 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 RNU6-10P-201ENST00000384036 107 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 MIR599-201ENST00000385069 95 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AC009161.1-201ENST00000417306 376 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AC100767.1-201ENST00000528178 123 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AP000676.1-201ENST00000533307 52 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.17□□□□□ -2.6
TCRBP04435 MIR4790-201ENST00000577799 79 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 MIR4324-201ENST00000584846 72 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AC022960.3-201ENST00000619794 441 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 AC090617.10-201ENST00000624308 134 ntBASIC-1.17□□□□□ -2.6
TCRBP04435 RNU6-888P-201ENST00000363010 101 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 RNU1-141P-201ENST00000364623 158 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 SNORA20-201ENST00000384662 132 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 SNORA69.1-201ENST00000390904 137 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 AL160004.2-201ENST00000432935 350 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 MIR548AE1-201ENST00000583292 70 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 NBR2-204ENST00000587322 63 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 AL162413.1-201ENST00000603198 110 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 MIR6841-201ENST00000637129 72 ntBASIC-1.18□□□□□ -2.6
TCRBP04435 RNU6-451P-201ENST00000362921 107 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 SNORD114-25-201ENST00000363742 72 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 RNU6-801P-201ENST00000364087 105 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 RNY3P4-201ENST00000384428 101 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 SNORD77.4-201ENST00000516158 81 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.19□□□□□ -2.6
TCRBP04435 YWHAEP2-201ENST00000580066 112 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 MIR548H5-201ENST00000580314 60 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 MIR3920-201ENST00000581751 86 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 MIR4280-201ENST00000582178 76 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 AC073114.1-201ENST00000612027 490 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 AL050303.3-201ENST00000613704 284 ntBASIC-1.19□□□□□ -2.6
TCRBP04435 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.2□□□□□ -2.6
TCRBP04435 RNU4-36P-201ENST00000364294 144 ntBASIC-1.2□□□□□ -2.6
TCRBP04435 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.2□□□□□ -2.6
TCRBP04435 RNU6-483P-201ENST00000384088 108 ntBASIC-1.2□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms