Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 SNORD115-16-201ENST00000363887 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-6-201ENST00000363942 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-42-201ENST00000364273 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-15-201ENST00000364809 81 ntBASIC0.98□□□□□ -2.25
VTNP04004 RNU6-275P-201ENST00000364910 107 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-1-201ENST00000364961 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-26-201ENST00000365067 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-10-201ENST00000365073 81 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-43-201ENST00000365503 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-36-201ENST00000365629 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 Y_RNA.521-201ENST00000384560 114 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORA75.2-201ENST00000391138 150 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORA75.3-201ENST00000391231 150 ntBASIC0.98□□□□□ -2.25
VTNP04004 SEPT7P4-201ENST00000437076 306 ntBASIC0.98□□□□□ -2.25
VTNP04004 RNU6-138P-201ENST00000515952 107 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD79.1-201ENST00000516069 84 ntBASIC0.98□□□□□ -2.25
VTNP04004 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
VTNP04004 MIR548AO-201ENST00000579992 96 ntBASIC0.98□□□□□ -2.25
VTNP04004 SNORD115-40-201ENST00000606510 82 ntBASIC0.98□□□□□ -2.25
VTNP04004 AC090425.1-201ENST00000610007 140 ntBASIC0.98□□□□□ -2.25
VTNP04004 Y_RNA.257-201ENST00000364596 102 ntBASIC0.97□□□□□ -2.25
VTNP04004 RNU6-643P-201ENST00000384018 107 ntBASIC0.97□□□□□ -2.25
VTNP04004 SNORD12-201ENST00000391002 90 ntBASIC0.97□□□□□ -2.25
VTNP04004 SNORD77.3-201ENST00000391113 65 ntBASIC0.97□□□□□ -2.25
VTNP04004 MIR1185-1-201ENST00000408598 86 ntBASIC0.97□□□□□ -2.25
VTNP04004 RNU4-43P-201ENST00000410628 137 ntBASIC0.97□□□□□ -2.25
VTNP04004 RNU6-1219P-201ENST00000516143 112 ntBASIC0.97□□□□□ -2.25
VTNP04004 AP002392.1-201ENST00000537692 208 ntBASIC0.97□□□□□ -2.25
VTNP04004 AC023827.1-201ENST00000569247 97 ntBASIC0.97□□□□□ -2.25
VTNP04004 AC097639.2-201ENST00000603159 172 ntBASIC0.97□□□□□ -2.25
VTNP04004 Y_RNA.75-201ENST00000362927 97 ntBASIC0.96□□□□□ -2.26
VTNP04004 Y_RNA.233-201ENST00000364407 101 ntBASIC0.96□□□□□ -2.26
VTNP04004 RNU6-200P-201ENST00000364743 107 ntBASIC0.96□□□□□ -2.26
VTNP04004 Y_RNA.410-201ENST00000383992 113 ntBASIC0.96□□□□□ -2.26
VTNP04004 MIR19B1-201ENST00000384829 87 ntBASIC0.96□□□□□ -2.26
VTNP04004 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
VTNP04004 AC063976.4-201ENST00000421971 163 ntBASIC0.96□□□□□ -2.26
VTNP04004 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.96□□□□□ -2.26
VTNP04004 AC002429.1-201ENST00000437672 148 ntBASIC0.96□□□□□ -2.26
VTNP04004 RPS29P24-201ENST00000486345 171 ntBASIC0.96□□□□□ -2.26
VTNP04004 MRPS18CP4-201ENST00000535821 231 ntBASIC0.96□□□□□ -2.26
VTNP04004 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
VTNP04004 Y_RNA.351-201ENST00000365436 96 ntBASIC0.95□□□□□ -2.26
VTNP04004 Y_RNA.354-201ENST00000365448 111 ntBASIC0.95□□□□□ -2.26
VTNP04004 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.95□□□□□ -2.26
VTNP04004 AL035398.1-201ENST00000430869 322 ntBASIC0.95□□□□□ -2.26
VTNP04004 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.95□□□□□ -2.26
VTNP04004 RNU7-21P-201ENST00000459430 62 ntBASIC0.95□□□□□ -2.26
VTNP04004 RNU2-13P-201ENST00000515909 113 ntBASIC0.95□□□□□ -2.26
VTNP04004 CYP3A137P-201ENST00000562436 69 ntBASIC0.95□□□□□ -2.26
VTNP04004 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.95□□□□□ -2.26
VTNP04004 FAM71BP1-201ENST00000604431 523 ntBASIC0.95□□□□□ -2.26
VTNP04004 MIR302B-201ENST00000362188 73 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNU6-654P-201ENST00000364373 107 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNU6-396P-201ENST00000365369 105 ntBASIC0.94□□□□□ -2.26
VTNP04004 Y_RNA.357-201ENST00000365487 109 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNU6-1336P-201ENST00000383886 109 ntBASIC0.94□□□□□ -2.26
VTNP04004 Y_RNA.440-201ENST00000384120 114 ntBASIC0.94□□□□□ -2.26
VTNP04004 Y_RNA.542-201ENST00000384641 111 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNA5SP95-201ENST00000410319 137 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNU2-11P-201ENST00000459191 187 ntBASIC0.94□□□□□ -2.26
VTNP04004 RNU7-90P-201ENST00000459216 62 ntBASIC0.94□□□□□ -2.26
VTNP04004 AP003716.2-201ENST00000528260 108 ntBASIC0.94□□□□□ -2.26
VTNP04004 MIR4431-201ENST00000579990 94 ntBASIC0.94□□□□□ -2.26
VTNP04004 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
VTNP04004 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
VTNP04004 SEPT14P17-201ENST00000617978 177 ntBASIC0.94□□□□□ -2.26
VTNP04004 MIR6516-201ENST00000630554 81 ntBASIC0.94□□□□□ -2.26
VTNP04004 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
VTNP04004 Y_RNA.29-201ENST00000362570 113 ntBASIC0.93□□□□□ -2.26
VTNP04004 SNORA25.7-201ENST00000364375 127 ntBASIC0.93□□□□□ -2.26
VTNP04004 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
VTNP04004 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
VTNP04004 MIR1302-7-201ENST00000408841 72 ntBASIC0.93□□□□□ -2.26
VTNP04004 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.93□□□□□ -2.26
VTNP04004 snoU13.16-201ENST00000459350 104 ntBASIC0.93□□□□□ -2.26
VTNP04004 RNU7-53P-201ENST00000516705 60 ntBASIC0.93□□□□□ -2.26
VTNP04004 RNU6-861P-201ENST00000516745 106 ntBASIC0.93□□□□□ -2.26
VTNP04004 RNU7-70P-201ENST00000516941 66 ntBASIC0.93□□□□□ -2.26
VTNP04004 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.93□□□□□ -2.26
VTNP04004 AC072026.1-201ENST00000605023 201 ntBASIC0.93□□□□□ -2.26
VTNP04004 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
VTNP04004 MIR6515-201ENST00000619843 57 ntBASIC0.93□□□□□ -2.26
VTNP04004 MIR376A2-201ENST00000636782 80 ntBASIC0.93□□□□□ -2.26
VTNP04004 AL596211.1-201ENST00000569873 2277 ntBASIC0.92□□□□□ -2.26
VTNP04004 RNU6-978P-201ENST00000364371 103 ntBASIC0.92□□□□□ -2.26
VTNP04004 Y_RNA.435-201ENST00000384095 112 ntBASIC0.92□□□□□ -2.26
VTNP04004 RNU6-913P-201ENST00000390913 95 ntBASIC0.92□□□□□ -2.26
VTNP04004 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
VTNP04004 UBL5P1-201ENST00000507979 193 ntBASIC0.92□□□□□ -2.26
VTNP04004 RNA5SP436-201ENST00000516020 115 ntBASIC0.92□□□□□ -2.26
VTNP04004 SNORA81.3-201ENST00000517283 198 ntBASIC0.92□□□□□ -2.26
VTNP04004 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.92□□□□□ -2.26
VTNP04004 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
VTNP04004 RNU6-312P-201ENST00000364629 107 ntBASIC0.91□□□□□ -2.26
VTNP04004 SNORA2B-201ENST00000384583 137 ntBASIC0.91□□□□□ -2.26
VTNP04004 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
VTNP04004 RNU6-205P-201ENST00000390858 107 ntBASIC0.91□□□□□ -2.26
VTNP04004 AC090844.1-201ENST00000422019 156 ntBASIC0.91□□□□□ -2.26
VTNP04004 HMGN1P33-201ENST00000432945 451 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms