Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.36□□□□□ -2.19
ZBED1O96006 RNU7-21P-201ENST00000459430 62 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 AC108729.3-201ENST00000513484 108 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 MIR3660-201ENST00000584845 100 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 MIR6844-201ENST00000637122 62 ntBASIC1.36□□□□□ -2.19
ZBED1O96006 Y_RNA.270-201ENST00000364693 104 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 SNORD37.2-201ENST00000391075 66 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 MIR548I3-201ENST00000408378 149 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 AL392103.1-201ENST00000447000 198 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
ZBED1O96006 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.35□□□□□ -2.19
ZBED1O96006 SNORA75.5-201ENST00000391291 81 ntBASIC1.34□□□□□ -2.19
ZBED1O96006 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.34□□□□□ -2.19
ZBED1O96006 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.34□□□□□ -2.19
ZBED1O96006 AP000753.3-201ENST00000604083 169 ntBASIC1.34□□□□□ -2.19
ZBED1O96006 MIR376A2-201ENST00000636782 80 ntBASIC1.34□□□□□ -2.19
ZBED1O96006 AL596211.1-201ENST00000569873 2277 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 SNORA1.1-201ENST00000364671 133 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 RNA5SP261-201ENST00000410536 106 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 RNU5E-9P-201ENST00000411164 104 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 RNA5SP404-201ENST00000517118 132 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 MIR3646-201ENST00000578301 84 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 AL359821.1-201ENST00000605519 182 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 MIR6516-201ENST00000630554 81 ntBASIC1.33□□□□□ -2.2
ZBED1O96006 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
ZBED1O96006 RNU6-818P-201ENST00000364837 108 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 RNU1-133P-201ENST00000364867 167 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 RNU6-913P-201ENST00000390913 95 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 MIR3668-201ENST00000582138 75 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 DNAJC19P2-201ENST00000593340 302 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 AC091932.4-201ENST00000623386 200 ntBASIC1.32□□□□□ -2.2
ZBED1O96006 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.31□□□□□ -2.2
ZBED1O96006 RNU6-1336P-201ENST00000383886 109 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 SNORD38B-201ENST00000384690 67 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 RNU6-1135P-201ENST00000411083 103 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 RNU6-1149P-201ENST00000516810 97 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 AC023827.1-201ENST00000569247 97 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 SNORD38B-202ENST00000625943 69 ntBASIC1.31□□□□□ -2.2
ZBED1O96006 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ZBED1O96006 Y_RNA.272-201ENST00000364696 102 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 Y_RNA.441-201ENST00000384123 112 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 RNU6-613P-201ENST00000410412 108 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 RNU6-1053P-201ENST00000515930 101 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
ZBED1O96006 AL020996.3-201ENST00000606617 222 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 AC098479.1-201ENST00000609225 154 ntBASIC1.3□□□□□ -2.2
ZBED1O96006 RNU6-654P-201ENST00000364373 107 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 SNORA2B-201ENST00000384583 137 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 SNORA20-201ENST00000384662 132 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 AC074198.2-201ENST00000508153 258 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.29□□□□□ -2.2
ZBED1O96006 MIR3152-201ENST00000579801 74 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 FTX_2.1-201ENST00000618816 94 ntBASIC1.29□□□□□ -2.2
ZBED1O96006 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 RNU6-1082P-201ENST00000364574 107 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 SNORD113.3-201ENST00000364630 78 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 RNU6-321P-201ENST00000410912 106 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 HMGN1P33-201ENST00000432945 451 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
ZBED1O96006 RN7SKP179-201ENST00000516126 217 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 RNU7-121P-201ENST00000516604 62 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 MIR4264-201ENST00000583520 66 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 AC131055.1-201ENST00000584626 316 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.28□□□□□ -2.2
ZBED1O96006 MIR8055-201ENST00000610739 97 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 Z97988.1-201ENST00000637697 135 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 MTND5P32-201ENST00000560711 1802 ntBASIC1.28□□□□□ -2.2
ZBED1O96006 Y_RNA.150-201ENST00000363562 102 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 Y_RNA.354-201ENST00000365448 111 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 RNU6-125P-201ENST00000384505 107 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 MIR200A-201ENST00000384875 90 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 SNORD111-201ENST00000408139 94 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 RNU6-588P-201ENST00000410281 105 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 RNU6-994P-201ENST00000410507 111 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 RNU2-64P-201ENST00000411315 191 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 SCARNA15-202ENST00000516881 127 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 MIR4781-201ENST00000585250 76 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
ZBED1O96006 Y_RNA.52-201ENST00000362760 96 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 RNU6-205P-201ENST00000390858 107 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 RPS3AP1-201ENST00000413190 320 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 MTATP6P21-201ENST00000440681 189 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 AC067940.1-201ENST00000458411 300 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 AC104465.1-201ENST00000611365 139 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 AC106800.4-201ENST00000614905 153 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 MIR3658-201ENST00000636291 56 ntBASIC1.26□□□□□ -2.21
ZBED1O96006 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ZBED1O96006 MIR377-201ENST00000362145 69 ntBASIC1.25□□□□□ -2.21
ZBED1O96006 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms